| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0405 |
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| Symbol | glyS |
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| ID | 6241907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 462028 |
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| End bp | 464127 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642592169 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_001856644 |
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| Protein GI | 186475174 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit
[TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.721596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.352354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAT CCCATCAAGC CACCCTGCTC GTCGAACTGC TGACCGAGGA ACTGCCGCCG
AAAGCGCTCG CCCGTCTTGG CGATGCATTC GCGGAAAGCA TCGCGCAACG CCTCGCGGCG
CGCGACCTGA TCGAAGGCGA ATTGCAGTTC GAACGTTACG CGACGCCGCG ACGTCTCGCC
GTAACCTTGA AGAACGTGCG CAATGTCGCG CCCGAAAAGC ATGTGCGCGA GAAAGTGCTG
CCCGTGTCGG TCGCACTCGA TGCGAACGGC CAGCCCACGC CGCCCCTCGC GAAGAAGCTC
GCGGCGCTCG GCTTCCCCGA CTTCTCGGTG AACGACCTCG AACGCGCGAA CGACGGCAAA
GCGGAAGCGT TCTTCCTGCG CTACGCGGCG CCCGGCGCCA CGCTCGCCGA AGGCCTGCAA
GCCGCGCTCG ACGAAACGCT CGCGAAGCTG CCCATTCCCA AGGTCATGAC GTATCAGCGT
CCGGATGGCT CGAACGTGCA GTTCGTGCGC CCGGTGCATC GTCTGACGGT GCTGCACGAC
AAAGAGATCG TGCCCGTCAC CGCGTTTGGC ATCGATGCCG ACGACACCAC GCTCGGCCAT
CGTTTCCTGT CTGAAGGCTT CGTGCAGATC CAGCACGCGG ATCACTACGC GGAAACGCTG
GTGCACAAGG GCAAGGTCGT GCCGAATTTC GCGGACCGCA AGGAAGCAAT CCGCACGCAT
CTGCTCGCGC AGGCGAACGG CGATCAGGTC GTGATGCCTG AGTCGCTGCT CGACGAAGTG
ACGTCGCTGG TCGAATGGCC CGTCGTCTAT GCGTGCGAGT TCGAGGACGA GTTCCTGCAG
GTGCCGCAGG AATGCCTGAT CCTCACGATG CAGACGAACC AGAAGTACTT CGCGCTCACC
GACGCGAACG GCAAGCTGCG CTCGCGCTTC CTGATCGTGT CGAACATCGA GACGAAGACG
CCGGGCGAGA TTGTCGAAGG CAATGAGCGC GTGGTGCGCC CGCGTCTCGC CGACGCGAAA
TTCTTCTTCG AGCAGGACAA GAAGCGTCCT CTCGCCGACC GCGTGCCGCA GCTCGCGAAC
GTCGTCTATC ACAACAAGCT CGGCTCGGCG CTGCAACGCG TCGAGCGCGT CGAAGCGCTG
GCAGGCGCAA TTGCGGCAAT GATCGGCGCC GATGTCGCCC TCGCAAAGCG CGGCGCGCAT
CTCTCGAAGG CGGACTTGCT GACCGACATG GTCGGCGAAT TCCCCGAACT GCAAGGCACG
ATGGGCACGT ACTACGCGCG CCACGACGGC GAGCCGGAAG AAGTCGCGCT TGCGTGCTCG
GAGCACTATC AGCCGCGCTT CTCGGGCGAT GCGTTGCCGT CGACGGCAAC GGGCACCGTC
GTCGCGCTCG CCGACAAGCT CGAAACGCTG GTCGGGATCT GGGGCATCGG CCTGCAACCG
ACGGGCGAAA AAGATCCGTT CGCACTGCGC CGTCACGCGC TCGGCGTACT GCGTATCCTG
GTCGAAAAGC AGTTGCCGAT CGATCTCGTC GAACTGCTGC GCGCCGCAAA TGCACAATTC
ACGAACGTGC CGAACGTCAC CGATTCGACG CAGGCCATCT ACGAATTCTG CATCGACCGC
CTGCGCGGCC AGTTGCGCGA ACGCGGCTAT TCGGCGGGCG AAGTCGATGC CGTCCTCGCG
CTGAACCCGA CACGTTTCGA CGACATCGTC GCCCGACTGG AGGCCGTGCG CGAGTTCGCG
GCGCTCGCGG AAGCGGCGTC GCTGGCGGCG GCAAATAAGC GCATCTCGAA CATCCTGAAG
AAGTCCGAAG CCGCGAGCGC GAACGGCGTG CAGATCACGT TGCTCATCGA AGCGGCCGAA
AAAGCGCTGC ATGCGCAACT TGAGCAGGTT GCGCCGCGCG TGCAGTCGCA GCTGGCCGAG
GGGGAGTACA CGGGCGCCCT GTCGGCACTC GCGGCGCTGC GCGAACCCGT CGACACGTTC
TTCAACGACG TGATGGTCAA CGCAGAAGAT CCGGCGCTGC GCGCGAATCG TCTTGCGCTG
CTCGGCGCGC TGCATCAACA GATGAACTGC GTCGCGGATA TTTCGCGGCT GGCAGCCTGA
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| Protein sequence | MTQSHQATLL VELLTEELPP KALARLGDAF AESIAQRLAA RDLIEGELQF ERYATPRRLA
VTLKNVRNVA PEKHVREKVL PVSVALDANG QPTPPLAKKL AALGFPDFSV NDLERANDGK
AEAFFLRYAA PGATLAEGLQ AALDETLAKL PIPKVMTYQR PDGSNVQFVR PVHRLTVLHD
KEIVPVTAFG IDADDTTLGH RFLSEGFVQI QHADHYAETL VHKGKVVPNF ADRKEAIRTH
LLAQANGDQV VMPESLLDEV TSLVEWPVVY ACEFEDEFLQ VPQECLILTM QTNQKYFALT
DANGKLRSRF LIVSNIETKT PGEIVEGNER VVRPRLADAK FFFEQDKKRP LADRVPQLAN
VVYHNKLGSA LQRVERVEAL AGAIAAMIGA DVALAKRGAH LSKADLLTDM VGEFPELQGT
MGTYYARHDG EPEEVALACS EHYQPRFSGD ALPSTATGTV VALADKLETL VGIWGIGLQP
TGEKDPFALR RHALGVLRIL VEKQLPIDLV ELLRAANAQF TNVPNVTDST QAIYEFCIDR
LRGQLRERGY SAGEVDAVLA LNPTRFDDIV ARLEAVREFA ALAEAASLAA ANKRISNILK
KSEAASANGV QITLLIEAAE KALHAQLEQV APRVQSQLAE GEYTGALSAL AALREPVDTF
FNDVMVNAED PALRANRLAL LGALHQQMNC VADISRLAA
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