Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_0358 |
Symbol | |
ID | 6241860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 402606 |
End bp | 407063 |
Gene Length | 4458 bp |
Protein Length | 1485 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642592122 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001856597 |
Protein GI | 186475127 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATTGCT TACGCGTCCG GATGCCGTTT CGCGCCCATT CGCTATGTCA CACCTCCCGG GTTCTCGTTC GCGAGGCCTT GATAGCCGGT TTCCTACTGG TGTTCGTGTT GCTCGGCGCT CAATCGGCGC TGGCCGCGCT TGGTCCGCGT CCGCACGGAT TTGCTCCCAG GCTCTCGGTC GGCGTGCTCG CCAGCGGCTG GTCGCCTTTT GAGACCTTCC AGGACGGCAG ATACACCGGG CTGAGCGTCG ATTATCTGCG TGCGATCGTC GGGCCGGACG TCGAAATCAC GACCAGGACC TATCCCGACA TGGAGCAATT GCTCGCAGCG GCCTGCGCGA ATCGCGTTGA CCTTGTGATG AGTATCGCTC GCACGCCCGA GCGTGAGCGT TGCCTGTCGT TTTCGGCTCC CTATTTTCGC GGATCGACTT CTGCCGTCAC GCTCGCGAGC AAGGCAATCT CGCTGTCACG CCAGTCACAG GTACAAGACG CGCGCGTTGC CGTCGAGCGC GGGTTCGCAC TTGGCGCCGT GCTGCGCGAG CGGTTTCCGC ATGCTCACTT TGATGCTTTC GCCGACACGC TCTCCGCCAT GCGTGCGATC CGGCAAGGCC GCGACGACGT GTACTTCGGC TTTACCCCAG CCGTGCGCCA CTATCTGGCG GATCCTGAGT TCGGCGGTCT GGTCGTCGCG TTCGAGGAGA CGGGGCAGGT GAGCGAAATG CGCTTTGCCG TGCCAGTGGC GAAAAGCGAG TTGCGCGACA AGCTGGAGCG CGGCCTCGCC GCGCTTCAAC CGGAAGATGA AGCCGCGATC CGGGCGCGCT GGCTCGGCGG CAGTTTCGAG GCGTGGCCCG CATCGGCTAC GTCGAATCTC GTGCTGAGCC GCGAAGAGCA GGCGTGGCTT CGAACGCTGC CGCCCTTGTC CGTCGGCTTC GACAGCGACT GGGCGCCATT CAGCGCGCTC GATGAGCTGG GTCGGCCGTC AGGCATCGCC GCCGACTATC TCGACTATCT GGGCCGGACG CTTGGCCTGA CGTTTCATCG CGAGCCGGCA AAGGACTGGA CGGCAACGCT TGCGGCTTTC AACCGCGGCG ACGTCGCGCT GCTCGCGACT GCCAACCGCA ACGATCCCCG GCTGGATCGC GCGACCTTCA CGCACGCATA CGAAACCTAC CCGCTCGTTA TTGTGGCGCG CGAGGGCGAA CCGGCCGCAC GCAGCCTGAA CGATTTCGCG GCGCGCCGCG TCATGGTGTC TGTCCATAGC AAGGGGGCGG TGCCTTTCCA GGCGTACGGT GTCGCGGCAA CGCATGTGAC CGTCGCACCG GGTCTGGACG CCGCGTTGAA GCTCCTGGCG GCGGGCGGCG CGGATGCGCT GGTCGGCAAT GTCGCGGAAG TCGACGCCGC GCTGACCGGG CAATACGCGG GCGTGCTCAA GATCGTCGGC ACGGTGCGCG AAGCGGATCC CGTCGGCTTC GCGGTTCGCG CCGACCTTGC GCCGCTGGCG GGGCTGATTG ACCGTGCGCT GCTGGCGATG CCGGCATCCG AGCACCAGCG CATCCATCAG AAATGGGTGA CGGGCGAAGG CCGACGCCGA GGCGGTTGGA GTGTGACGGC GCTGCGCTTG CTGCCCGTGC TGATCGGTAT CGCCGTAATC CTGCTGTTGA CCTTGCGGGC CTACGTGTTG CTGCAGCGAG AAGTGGCCCG GCGCGAGCGC ACCGAGCGCG AGCTCGAGTC GCAGCTGAAC TTCCAGCAGA CGATGATGGA GATGGTTCCG TATCCGCTCG TCGCCAAAGA TCTGCAAGGG CGCTACATCG CCGTCAACCG CGCCTACGAG GAAGCGACAG GACTTCGGCG TGAACGGGTG ATCGGCCGCA CGAGTGCCGA CGTTCACGCG TGGGGCGAGG AAAACAGCCT GCGGCTCGAA CAGTTGTCGC GCAGTGCGCT GCAAAGCGGC TCGGCCACGC AGATCGAGCT GGCGTTCGAA GACTGCGACG GCGACAGCCG GCATGGCCTG TTCTGCGTAT GCGTGTGCGA TGACGCAGAC GGCGCGCCCT TATGCTTGCT CGGTACCCTC GTCGATATCA CCGACATCCG CCGCGCCGAA ATGCTCGCGA GCGAGACCCA GCGGCGTCTC GTCGACGTCA CCAGTTCTCT GCCGGCCGTG GTCTTTCAGT TGCGCCGCGG GCTTGATGGC GCGTACTCGT TCCTCTATGT CGGCGGGGAT ACCGAACATC TGCTGGGCTA TGACAGCGCT GCGCTGATGC GCAGCGCTGC GCTCGACTTC GGCACAATTT TCGCGGACGA CCGACCGGGC GTCGTGGCAG CGCTCGGGCG CTCCGCGGAG TTGTCCGAGC CGCTGCACCT CGAGTTTCGC ATCAACTGTC CCGCCGAGCA GCGCTGGGTT CGTGCCGAAC TTGCGCCGCG CCGTGAGCCG AGCGGCGCGA CGGTGTGGAG CGGCTACTGG GTCGACGCGA GCATCGAACG GCTGCGCGCC GACGAACTGG CGCATGCGCG CGATCTGGCC GAAGCCGCGT CGCGCGCAAA GGACGACTTC CTCGCAATGA TGAGCCACGA GATTCGCACG CCGATGAACG GTGTGCTCGG GCTCGTCGAG GTGCTCGAGC GTACGCGGCT CGATGCGGAC CAGGGCGAGA TGCTCGGCAT GATTCATGAA TCGGCGGGCG CATTGCTGCA GATTCTCGAC GACCTGCTCG ACTATTCGAA GATCGAGGCG GGACGATTGA CGATCGAATC CGAGCCCATC GACCTGCGCG ATCTCGTCGA TACGGCGGTC GGCCTGTTGG CGGGGCGTGC ACATGAGAAA GGCTTGAAAG TGCGCGTCGA CGTCGACCCG CAGGTTGCGG CGACGCTACG CGGCGACAGC GTGCGCTTGC GGCAAATCCT GTTCAATCTG CTCGGCAACG CGATCAAGTT CACCCCGCAG GGCGAGGTCG ATGTTCAGGT GCAGGTGGCC GAGCAGAATG CGTCGGGGCA AACAGTCGAG ATCACCGTCG ACGATACAGG CATCGGCATC GCGCCGGATG TTCAGGCGCG GCTCTTCGAG CCTTTCGTGC AGGCGGAGTC GTCGACCACG CGGCGCTTCG GCGGCACGGG TCTTGGGCTG ACGATCTGCC GCAAGCTGGT CGCGCTGATG GGCGGCACGC TGTCGCTGTA CAGCACGCCG GGCGAAGGCA CGCGCATGAC ATTGCGTCTG CTGATGCCGG TCGACACGCA GCACTACAGC GCTGGCGGGT TGCGCGGCAA GCGCGGGATC GTTCTCACAT CCGACGCGCC CGTCGCGACG GCGCTCGTTC ACTTCGGTGC GGCACTGGGT CTCGAACTGC GTTGTGCCCA TGCTGCCGGC TGGCCGGATC CGAAATCGCT AGAAGGCATG GATCTTATTT TTGTCGGCGA CGGCGTCGAT CTGCCCGCTG AGGTCGCGCA ATCCAGAGCT AAACTCATCA GCCTCACCGA GAAGCCCAAA CCGACCGGCT ACCGGATCGT CGATAACGCC GTGCGCGTCA GCATCAACCC GATTTCATGG CGCGGTTTGA GCGCGGCGTG CGCCGCTGCA CTGACGGGCC TTTCACCGAC GCCCGCGCGT CAGTCAGGCG CGGCGGACGC CGTCACGACA CCGCCCGACC GTGAACGCGC GGTTGCATGC GGGCGGCTCG TGCTTGTGGC CGAAGATCAT CCTGTCAATC AGGAACTGAT CCGTCATCAA CTGGCGCTGC TCGGTTTTGC GTGCGACGTC GTCAACGACG GCGCCGAGGC GCTCGAAGCG CTCGACGCGA CACCGTACGG TTTCTTGATC ACCGACTGCC ACATGCCGCG AATGTCGGGC TACGAACTGG CGCAGTCGGT TCGCGAGAAA GAGCGGCTGA CGGGCGGGCG TCTGCCGATA CTCGGCATCA CCGCGAACAC CGCGCCCGAA GATCTGAATG CGTGCCGCGA AGCCGGCATG GACGACTGTC TCGTCAAACC GACGCGCCTC GCCACCTTGC GCGAGTATCT CAGCCGATGG TTCGGCGCCG ACAATGCGCG GCCTGCCGCG GAAACCGAAA CGACGACGTC TTTTGTCGCG CGCGACACCG AGCCAGATGA CGCCGACAAC ATCGCGTTCG TTCCTGTCGA TCTCAATCAG TTGACGCAGA TCTGGGGCAG CGAATCGACG GTCAAGTCGT TGCTCGATGC GTTCGTGTCG GCAGTGCGCG ACGACCTGCG TGCATTGCCG CCCCTTTTGA ACGAGCCCGA CGTCGCCGCA TTGAGAGAAT GGCTTCATCG CGTCTCGGGC GCAGTGGGCG TGTTGCGGTA TCCGCCGTTG CTCGGTGCGC TCGAACACTA CCGGCGCCAG CTGACGAACC CACCGTCCGA GACATTGCGC AGCGAGGGCA TCGCGCTTGT CCGCCAGTGC AACACGATGC TCGACGGTAT CGAAGAGCAG GCGGCGTTAC TGCCCTGA
|
Protein sequence | MHCLRVRMPF RAHSLCHTSR VLVREALIAG FLLVFVLLGA QSALAALGPR PHGFAPRLSV GVLASGWSPF ETFQDGRYTG LSVDYLRAIV GPDVEITTRT YPDMEQLLAA ACANRVDLVM SIARTPERER CLSFSAPYFR GSTSAVTLAS KAISLSRQSQ VQDARVAVER GFALGAVLRE RFPHAHFDAF ADTLSAMRAI RQGRDDVYFG FTPAVRHYLA DPEFGGLVVA FEETGQVSEM RFAVPVAKSE LRDKLERGLA ALQPEDEAAI RARWLGGSFE AWPASATSNL VLSREEQAWL RTLPPLSVGF DSDWAPFSAL DELGRPSGIA ADYLDYLGRT LGLTFHREPA KDWTATLAAF NRGDVALLAT ANRNDPRLDR ATFTHAYETY PLVIVAREGE PAARSLNDFA ARRVMVSVHS KGAVPFQAYG VAATHVTVAP GLDAALKLLA AGGADALVGN VAEVDAALTG QYAGVLKIVG TVREADPVGF AVRADLAPLA GLIDRALLAM PASEHQRIHQ KWVTGEGRRR GGWSVTALRL LPVLIGIAVI LLLTLRAYVL LQREVARRER TERELESQLN FQQTMMEMVP YPLVAKDLQG RYIAVNRAYE EATGLRRERV IGRTSADVHA WGEENSLRLE QLSRSALQSG SATQIELAFE DCDGDSRHGL FCVCVCDDAD GAPLCLLGTL VDITDIRRAE MLASETQRRL VDVTSSLPAV VFQLRRGLDG AYSFLYVGGD TEHLLGYDSA ALMRSAALDF GTIFADDRPG VVAALGRSAE LSEPLHLEFR INCPAEQRWV RAELAPRREP SGATVWSGYW VDASIERLRA DELAHARDLA EAASRAKDDF LAMMSHEIRT PMNGVLGLVE VLERTRLDAD QGEMLGMIHE SAGALLQILD DLLDYSKIEA GRLTIESEPI DLRDLVDTAV GLLAGRAHEK GLKVRVDVDP QVAATLRGDS VRLRQILFNL LGNAIKFTPQ GEVDVQVQVA EQNASGQTVE ITVDDTGIGI APDVQARLFE PFVQAESSTT RRFGGTGLGL TICRKLVALM GGTLSLYSTP GEGTRMTLRL LMPVDTQHYS AGGLRGKRGI VLTSDAPVAT ALVHFGAALG LELRCAHAAG WPDPKSLEGM DLIFVGDGVD LPAEVAQSRA KLISLTEKPK PTGYRIVDNA VRVSINPISW RGLSAACAAA LTGLSPTPAR QSGAADAVTT PPDRERAVAC GRLVLVAEDH PVNQELIRHQ LALLGFACDV VNDGAEALEA LDATPYGFLI TDCHMPRMSG YELAQSVREK ERLTGGRLPI LGITANTAPE DLNACREAGM DDCLVKPTRL ATLREYLSRW FGADNARPAA ETETTTSFVA RDTEPDDADN IAFVPVDLNQ LTQIWGSEST VKSLLDAFVS AVRDDLRALP PLLNEPDVAA LREWLHRVSG AVGVLRYPPL LGALEHYRRQ LTNPPSETLR SEGIALVRQC NTMLDGIEEQ AALLP
|
| |