| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0338 |
|---|
| Symbol | |
|---|
| ID | 6241840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 379722 |
|---|
| End bp | 380807 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642592102 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001856577 |
|---|
| Protein GI | 186475107 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.224115 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGC GTAATCAGGC CCGCGATGAC GGGCAGGTGC AGGATCTGCG CCCTCGCCCG
GTCAGGCTGA CCAGCGACAT GAGCCTGCCG AAACTGTCAC CGGTCGAAGT CGGCAGCTAC
GTCGTTGCGC TGCTCGCGAT GTGGGCCGTG CTCGAACTGA AGCTGCTGGG CGCGCTGCTC
GCCGGCATGC TCGTGTTCCA GCTCGTGCAT ACGCTCGCAC CGCGCATCGA GAAGCACATG
TCGAGCGGGC GCGCGCGCTG GCTTGCCGTG GTGATTCTGT CCGTGGTGAT CGTCGGCACG
CTCACGGGCT TCACCGTTGC CGTCATCGAA CACTTCGAGA AAGACGTGCC GAGCGTGCAG
AAGCTGCTCG ATCAGGCGAT GTCGCTGATC GATCAGGCAC GCGGCCGTCT GCCCGAATTC
ATCGCGCAGA ACCTGCCCGT TTCCACTGAA CAGATGAAGG AGAAGGCCGC CGTGCTGATG
CAGACGCATG CGAGCACGCT GTCGCAGGGC GGCAAGAACG CGGCGCGCAT CTTCACCCAT
GTGCTGATCG GGATGATCAT TGGCGCAATC ATCGCGGTCG GCGCGCAAAG GCATTTGCAG
CGGCTGCCGC TGTCGACGGC GTTCATCGCG CGCGTCAGCC GTTTCGCCGA CGCGTTCCGC
CGCATCGTGT TCGCGCAAGT GAAAATTTCG GCGATCAACA CGGTGTTCAC GGGAATCTTC
CTGTTGCTGC TGTTGCCGAT ATTTCACGCA CCGCTGCCAA TGGCGAAGAC GCTCGTCATG
ATCACGTTCA TCGTCGGCCT GCTGCCCGTC ATCGGCAATC TGATTTCGAA CACGCTGATC
GTGGCCGTTG CGCTGTCGGT GAGTTTTCCG GCTGCCGTGA CGGCGCTGAT CTTTCTGATC
CTGATCCACA AGCTCGAGTA CTTCCTGAAC GCACGCATCG TCGGCGGACA GATCGAGGCG
CGTGCATGGG AACTGCTGAT CGCGATGCTC GTGATGGAAG CCGCGTTCGG CATTCCGGGC
GTGATCGCCG CGCCGATCTT CTATGCGTAC ATCAAGCGCG AGCTGATCTA TCTGCGGCTC
GTGTGA
|
|---|
| Protein sequence | MAKRNQARDD GQVQDLRPRP VRLTSDMSLP KLSPVEVGSY VVALLAMWAV LELKLLGALL
AGMLVFQLVH TLAPRIEKHM SSGRARWLAV VILSVVIVGT LTGFTVAVIE HFEKDVPSVQ
KLLDQAMSLI DQARGRLPEF IAQNLPVSTE QMKEKAAVLM QTHASTLSQG GKNAARIFTH
VLIGMIIGAI IAVGAQRHLQ RLPLSTAFIA RVSRFADAFR RIVFAQVKIS AINTVFTGIF
LLLLLPIFHA PLPMAKTLVM ITFIVGLLPV IGNLISNTLI VAVALSVSFP AAVTALIFLI
LIHKLEYFLN ARIVGGQIEA RAWELLIAML VMEAAFGIPG VIAAPIFYAY IKRELIYLRL
V
|
|---|
| |