Gene Bphy_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0330 
Symbol 
ID6241832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp371287 
End bp371850 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content67% 
IMG OID642592094 
Product3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 
Protein accessionYP_001856569 
Protein GI186475099 
COG category[R] General function prediction only 
COG ID[COG1778] Low specificity phosphatase (HAD superfamily) 
TIGRFAM ID[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTTG CCGCCCTGAC GGCCGCCGAA CGCGCGAGCC GCGTCAAGCT GATGATTTTC 
GACGTCGATG GTGTGCTCAC CGACGGCGGC CTGCTGTTTA CAGCTCAGGG CGACACGATG
AAGGCGTTCA ACTCGATGGA CGGCCACGGC GCGAAGCTTC TGCGCGAAGC CGGCATCGAC
ACCGCGATCA TCACGGGGCG CCAATCGGAA ATCGTCGCGA AGCGCGCGGA AAATCTGCGC
ATCACGCACG TGTATCAGGG CGTCGAGCAC AAGCTCGCGG CATTCGAGCA GTTGCTGAAG
CAAACAGGCC GCACGCCGGA ACAATGCGGC TACATGGGCG ACGACTGGGT CGATCTCGCC
GTCATGCTGA AGGTCGGTTT CGCGGCCGCA CCGGCGAACT CGCATCCCGA AGTGATCGCG
AGGGCGCACT GGGTGAGCGA AGCGCGCGGC GGCCACGGCG CAGTGCGCGA GGTGTGCGAC
GCGCTACTGC GCGCCCAGGG CCGCTACGAC GAACTGCTCG CCGCCGCATG CAGCGGCGCC
ATGCCGCGGG GCCTCGTCGG ATGA
 
Protein sequence
MALAALTAAE RASRVKLMIF DVDGVLTDGG LLFTAQGDTM KAFNSMDGHG AKLLREAGID 
TAIITGRQSE IVAKRAENLR ITHVYQGVEH KLAAFEQLLK QTGRTPEQCG YMGDDWVDLA
VMLKVGFAAA PANSHPEVIA RAHWVSEARG GHGAVREVCD ALLRAQGRYD ELLAAACSGA
MPRGLVG