Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_0330 |
Symbol | |
ID | 6241832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 371287 |
End bp | 371850 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642592094 |
Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase |
Protein accession | YP_001856569 |
Protein GI | 186475099 |
COG category | [R] General function prediction only |
COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA [TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCTTG CCGCCCTGAC GGCCGCCGAA CGCGCGAGCC GCGTCAAGCT GATGATTTTC GACGTCGATG GTGTGCTCAC CGACGGCGGC CTGCTGTTTA CAGCTCAGGG CGACACGATG AAGGCGTTCA ACTCGATGGA CGGCCACGGC GCGAAGCTTC TGCGCGAAGC CGGCATCGAC ACCGCGATCA TCACGGGGCG CCAATCGGAA ATCGTCGCGA AGCGCGCGGA AAATCTGCGC ATCACGCACG TGTATCAGGG CGTCGAGCAC AAGCTCGCGG CATTCGAGCA GTTGCTGAAG CAAACAGGCC GCACGCCGGA ACAATGCGGC TACATGGGCG ACGACTGGGT CGATCTCGCC GTCATGCTGA AGGTCGGTTT CGCGGCCGCA CCGGCGAACT CGCATCCCGA AGTGATCGCG AGGGCGCACT GGGTGAGCGA AGCGCGCGGC GGCCACGGCG CAGTGCGCGA GGTGTGCGAC GCGCTACTGC GCGCCCAGGG CCGCTACGAC GAACTGCTCG CCGCCGCATG CAGCGGCGCC ATGCCGCGGG GCCTCGTCGG ATGA
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Protein sequence | MALAALTAAE RASRVKLMIF DVDGVLTDGG LLFTAQGDTM KAFNSMDGHG AKLLREAGID TAIITGRQSE IVAKRAENLR ITHVYQGVEH KLAAFEQLLK QTGRTPEQCG YMGDDWVDLA VMLKVGFAAA PANSHPEVIA RAHWVSEARG GHGAVREVCD ALLRAQGRYD ELLAAACSGA MPRGLVG
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