| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0328 |
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| Symbol | |
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| ID | 6241830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 369987 |
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| End bp | 370664 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642592092 |
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| Product | lipopolysaccharide transport periplasmic protein LptA |
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| Protein accession | YP_001856567 |
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| Protein GI | 186475097 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.331017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGAAT CGTTCCCCCG TTTTGAGTCC GGCCGCACGC GCGCGCTCCG CGCGAGCCGC
GCCGGGCTGG CGGCACTTTT GATCGCATTG CCGTTTGCCG GCTTTGCGCC GCTTGCGCAT
GCCGAACGTG CCGACAAGGA CAAACCGCTC AATATCGAAG CGGACAACAT GACGTATGAC
GACCTCAAGC AGGTCAATAT TTTCACCGGG CACGTGGTCG CGACCAAAGG CACGATCCTG
ATCCGCGCCG ACCGCGTCGA AGTGACGCAG GATCCGCAGG GCTATCAGTA TGCAACAGGC
ACGTCGACGG GCAAGAACCT CGCGTACTTC CGCCAGAAGC GCGATGGCGT CAACGAATAT
ATCGACGGCG ATGCTGAACG CATCGACTAC GACGGCAAGC AGGATCTGAC CACGCTGACC
ACGCGTGCAA CGGTGCGCCG TCTGCAAGGC ACGAACACGA TCATGGACGA AGTGCATGGC
AGCGTAATCA CTTACGACGG CCAGAACGAC TTCTACACGG CGAAGGCCGG CAAGGATGTC
GCGAGCCCGG GCAATCCGAA CGGCCGCGTG CGCGCGATGC TGTCGCCTCG CAACGGCGGC
AGCCAGCCGC TCAGCGGTCC GTCGGCCACA CTCCAGCCCG CCAATCAATT CCCGGCACAA
GGAACGACGA AGCCGTGA
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| Protein sequence | MNESFPRFES GRTRALRASR AGLAALLIAL PFAGFAPLAH AERADKDKPL NIEADNMTYD
DLKQVNIFTG HVVATKGTIL IRADRVEVTQ DPQGYQYATG TSTGKNLAYF RQKRDGVNEY
IDGDAERIDY DGKQDLTTLT TRATVRRLQG TNTIMDEVHG SVITYDGQND FYTAKAGKDV
ASPGNPNGRV RAMLSPRNGG SQPLSGPSAT LQPANQFPAQ GTTKP
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