Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_0317 |
Symbol | lolB |
ID | 6241819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 358777 |
End bp | 359409 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642592081 |
Product | outer membrane lipoprotein LolB |
Protein accession | YP_001856556 |
Protein GI | 186475086 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0182895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACTTTT CTTTTCCCGT GTTTTCCTCT CCGGCGCCGC GTCGCGCGGC GCTGGGTCTC GCAACGGCAG CCATCCTCGC GTTGTCGGGC TGTGCCTCCG TCAAGCCGCA GGGCCCGTCG ACCTCGAATG CGGCAACGGC CGTCACTGCG CAGACGAGCC GCGCCTATCA CGGCCGCTTT GCCGTTCAGT ATGTGGACCA GAACGGTCAG CAGCGCAATG CGTACGGCAA CTTCGACTGG CAGGAACGCG GCGACACCGT CACGCTGCAG CTGCGCAATC CGCTTGGACA GACAATGGCG ATCGTCACGT CGTCGCCGTC GGCGGCCACG CTCGAGTTGC CGAACCGTCA GCCATTGACG GCCGATAACG TGTCCACGCT GATGCAGAAC GCACTCGGAT TCTCGCTGCC TGTCGAAGGT CTGCGCTACT GGCTGCAGCC GTCGGTTGCA CCGACATCGA AGGCGAAGAC CGAGAAAGAT CCGCAACAGG TATCGCGTCT GAAGGAAATC GAACAGGACG GGTGGACGAT CGACTACATC GCCTATGCCG ATGCGCCTGC AACCGGCGTG AAGCGCGTGA ATCTCGCGCG CACCGAACCA CCGCTCGACA TCAAGCTCGT GCTCGACCAG TAA
|
Protein sequence | MHFSFPVFSS PAPRRAALGL ATAAILALSG CASVKPQGPS TSNAATAVTA QTSRAYHGRF AVQYVDQNGQ QRNAYGNFDW QERGDTVTLQ LRNPLGQTMA IVTSSPSAAT LELPNRQPLT ADNVSTLMQN ALGFSLPVEG LRYWLQPSVA PTSKAKTEKD PQQVSRLKEI EQDGWTIDYI AYADAPATGV KRVNLARTEP PLDIKLVLDQ
|
| |