Gene Bphy_0317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0317 
SymbollolB 
ID6241819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp358777 
End bp359409 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content63% 
IMG OID642592081 
Productouter membrane lipoprotein LolB 
Protein accessionYP_001856556 
Protein GI186475086 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis 
TIGRFAM ID[TIGR00548] outer membrane lipoprotein LolB 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0182895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTTTT CTTTTCCCGT GTTTTCCTCT CCGGCGCCGC GTCGCGCGGC GCTGGGTCTC 
GCAACGGCAG CCATCCTCGC GTTGTCGGGC TGTGCCTCCG TCAAGCCGCA GGGCCCGTCG
ACCTCGAATG CGGCAACGGC CGTCACTGCG CAGACGAGCC GCGCCTATCA CGGCCGCTTT
GCCGTTCAGT ATGTGGACCA GAACGGTCAG CAGCGCAATG CGTACGGCAA CTTCGACTGG
CAGGAACGCG GCGACACCGT CACGCTGCAG CTGCGCAATC CGCTTGGACA GACAATGGCG
ATCGTCACGT CGTCGCCGTC GGCGGCCACG CTCGAGTTGC CGAACCGTCA GCCATTGACG
GCCGATAACG TGTCCACGCT GATGCAGAAC GCACTCGGAT TCTCGCTGCC TGTCGAAGGT
CTGCGCTACT GGCTGCAGCC GTCGGTTGCA CCGACATCGA AGGCGAAGAC CGAGAAAGAT
CCGCAACAGG TATCGCGTCT GAAGGAAATC GAACAGGACG GGTGGACGAT CGACTACATC
GCCTATGCCG ATGCGCCTGC AACCGGCGTG AAGCGCGTGA ATCTCGCGCG CACCGAACCA
CCGCTCGACA TCAAGCTCGT GCTCGACCAG TAA
 
Protein sequence
MHFSFPVFSS PAPRRAALGL ATAAILALSG CASVKPQGPS TSNAATAVTA QTSRAYHGRF 
AVQYVDQNGQ QRNAYGNFDW QERGDTVTLQ LRNPLGQTMA IVTSSPSAAT LELPNRQPLT
ADNVSTLMQN ALGFSLPVEG LRYWLQPSVA PTSKAKTEKD PQQVSRLKEI EQDGWTIDYI
AYADAPATGV KRVNLARTEP PLDIKLVLDQ