Gene Bphy_0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0276 
Symbol 
ID6241778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp317629 
End bp319302 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content64% 
IMG OID642592039 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_001856515 
Protein GI186475045 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID[TIGR02866] cytochrome c oxidase, subunit II 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATTT TGGGTAAGGA AGCTATGAAA ACAATCAAGC GAGCCCTCAC GGGTGTGCTG 
GCGTGTAGCG GACTGCTGTT CGCCGGTGCC GCCCTTGCAG TCGGCGACAG TCCAGGCGGC
CCCCGCGTCA ACGAGATCAA TCTCCAGCCG CCGGTGACGA GGATTGCCGA AGAGCTCTAC
AGCCTCCATA CGTTCATGCT GATTCTCTGC ACGGTGATTT TCATCGGCGT GTTCGGCGTG
ATGTTCTATT CGATCTTCGC GCACCGCAAG TCGAAGGGCT ACAAGGCGGC AAATTTCCAC
GAAAGCACCA CCGTCGAAAT CATCTGGACG GTCGTCCCGT TCATCATCGT CGTGCTGATG
GCGCTGCCCG CCACGAAGAC GGTCGTCGCG ATGAAAGACA CCACCAACGC CGACCTGACG
GTCAAGGTCA CCGGCTATCA GTGGAAGTGG GCCTATGACT ACGTTAAGGG TCCGGGCGAA
GGCATCAACT TCTTTTCGAC GCTGACCACG CCGCGCGCCG AAGTCGACGG CCGTCAGCCG
ATCACCGACA CGTACCTGCA GGAAGTCGAC AACCCGCTCG TCGTGCCCGT GAACAAGAAG
ATCCGCATCA TCACCACCGC CAACGACGTC GTGCACTCGT GGTACGTGCC CGCGTTCGGC
GTGAAGCAGG ACGCTATTCC CGGCTTCGTG CGCGACACGT GGTTCAGGGC GGAGAAGGTA
GGCACCTATC GCGGCTTCTG TACCGAGCTG TGCGGCAAGG AACACGCGTT CATGCCCGTC
GTCGTCAACG TGTTGTCGGA TGAGGATTAC GCGAAGTGGG TCGACGACCA GAAGAAGAAA
ATGGCCGCCG GTCAGGACGA CCCGAACAAG AACTACACGC TGGCCGAACT GATGGAGCGC
GGCGGCAAGG TGTATTCGGC GAACTGCGCC GTCTGCCACC AGCCGACGGG CAAGGGCGCA
GGCGCGTTCC CGGCGCTCGA CGGCAGCAAG GTCGCGAACG GCCCCCTCGC CGAGCACGTG
AGCATCGTGC TGAAGGGCAA GAATGCGATG CCGTCGTGGG CGCCGACGCT GAACGACGTC
GAGATCGCTT CCGTCATCAC GTTCGAACGC AATTCGTGGG GCAACCACAC GGGCGACATC
CTGCAGCCGA AGCAGGTCGC CGACGCGCGC AACGGTCGTC TGCCGTCGGG CGGCGATCAC
CTCGCAGGCG CAGCAGCGGC CGCAGCATCG GACGCCGCAG CGGCGAGCGG AGCGGAAGGC
GCGAGCGGCG CGCCCGCGGC AAGCGGGGAG GCGGGCGCAT CGGCTACCGC GCCAGCTTCG
GGTGCATCGG ACGGCGCAGC CGCTTCGGCG CCGCAGGCAT CGCTGCCCGC CAGCGTCTAC
TTCGAGACCA ACAAGAGCTC TCTGCCCACC GACGCGAAAG CGGCCATCGA AGCCGCCGCC
GCATACGCAA AGGCGCATCC GGACGCGAAG TTTGCGCTCT CGGGTTTCAC CGACGCAACC
GGTTCGGCGG ATAAGAATGC AAAGCTCGCC AAGGCGCGTG CCGAAGCCGT CCGCGATGCG
CTCAAGGCGG CAGGCATCGC CGAAGACCAT ATTATTTTGA AGAAGCCGGA GACGATCACG
GGCGGTGCGG ACGCGAAGGA AGCACGCCGT GTAGAGATCA GCCCAGCGGC CTGA
 
Protein sequence
MEILGKEAMK TIKRALTGVL ACSGLLFAGA ALAVGDSPGG PRVNEINLQP PVTRIAEELY 
SLHTFMLILC TVIFIGVFGV MFYSIFAHRK SKGYKAANFH ESTTVEIIWT VVPFIIVVLM
ALPATKTVVA MKDTTNADLT VKVTGYQWKW AYDYVKGPGE GINFFSTLTT PRAEVDGRQP
ITDTYLQEVD NPLVVPVNKK IRIITTANDV VHSWYVPAFG VKQDAIPGFV RDTWFRAEKV
GTYRGFCTEL CGKEHAFMPV VVNVLSDEDY AKWVDDQKKK MAAGQDDPNK NYTLAELMER
GGKVYSANCA VCHQPTGKGA GAFPALDGSK VANGPLAEHV SIVLKGKNAM PSWAPTLNDV
EIASVITFER NSWGNHTGDI LQPKQVADAR NGRLPSGGDH LAGAAAAAAS DAAAASGAEG
ASGAPAASGE AGASATAPAS GASDGAAASA PQASLPASVY FETNKSSLPT DAKAAIEAAA
AYAKAHPDAK FALSGFTDAT GSADKNAKLA KARAEAVRDA LKAAGIAEDH IILKKPETIT
GGADAKEARR VEISPAA