| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0271 |
|---|
| Symbol | |
|---|
| ID | 6241773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 313940 |
|---|
| End bp | 314491 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642592034 |
|---|
| Product | appr-1-p processing domain-containing protein |
|---|
| Protein accession | YP_001856510 |
|---|
| Protein GI | 186475040 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACCA TTGGCCATTG CATGCTCGAG GCGCGCGTCG TCGACATCAC GACGCTCGAT
GTCGACGCGG TCGTCAACGC GGCGAACACG TCATTGCTGG GCGGCGGTGG CGTAGACGGC
GCGCTTCATC GCGCGGCCGG CGCCGATCTG CTGCGCGAGT GCCAGACGCT GGGCGGCTGC
GTGACGGGCG ACGCGAAGAT CACGGGCGGA CATCGTCTGA AGGCGCGCCA CGTGATTCAT
GCCGTCGGTC CCGTATGGCA CGGCGGCGGG CGCGGCGAGG CGGAGCTGCT GGCATCGTGC
TACCGACGCT CGCTTGAACT CGCGCGCGAT GCCAAAGCAA AGAGCATTGC ATTTCCGGCG
ATCAGTTGCG GCGTTTATCG CTTCCCGGCC GACGAAGCAG TACGCATCGC AATGCAAACC
GTGATCGACA CGCTGCCTCG CGTGTCTACC GTCGAGCGCG TGATCTTCGC GTGTTTCGAC
GAAGCAATGC ATGCGCGCTA CAAGGCGGAG TTCGGGCGGC GCGTTCAGGC GCCGCCCTCG
AACCCCGCCT GA
|
|---|
| Protein sequence | MLTIGHCMLE ARVVDITTLD VDAVVNAANT SLLGGGGVDG ALHRAAGADL LRECQTLGGC
VTGDAKITGG HRLKARHVIH AVGPVWHGGG RGEAELLASC YRRSLELARD AKAKSIAFPA
ISCGVYRFPA DEAVRIAMQT VIDTLPRVST VERVIFACFD EAMHARYKAE FGRRVQAPPS
NPA
|
|---|
| |