Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_0224 |
Symbol | |
ID | 6241726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 246852 |
End bp | 247931 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642591986 |
Product | spermidine/putrescine ABC transporter ATPase subunit |
Protein accession | YP_001856463 |
Protein GI | 186474993 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTTC TTGAAATCGA CAGTCTGCAC AAGGCGTTCG GCGCAAACAC GGCGCTGCAT CACTTCGACA TGAAGATCGA GCGCGGCGAG TTCATCACGT TTCTCGGGCC GTCGGGGTGC GGCAAGACGA CCGTGCTGCG CATGATCGCC GGCTTCGAAA CGCCGACGCG CGGCACGATC CGCCTCGACG GGCGCGACGT CACGCATCTG CGCACGCGAC AGCGCAAGGT CGGCATGGTG TTTCAGGCGT ATGCGCTGTT TCCGAACATG ACGGTCGCGC AGAACATCGG CTTTGGGCTG AAGATCGCGA ACCGGCCGCA GAGCGAGATC AAACAGCGCG TCGACGAAAT GCTGCAACTG ATCAAGCTGC CGCACCTGGG CGAACGGTAT CCGTGGCAGC TGTCGGGCGG CCAGCAGCAG CGTGTCGCGC TGGCGCGCGC GCTCGCTGGC AAGCCGCAAG TGCTGCTGCT CGACGAGCCG CTGTCGGCAC TCGACGCGAA GATCCGCATT TCGCTGCGTC AGGACATTCG CGCGTTGCAG CGCGAACTCG GCATCACGTC GATCTTCGTC ACGCACGATC AGGAAGAGGC GCTGTCGATT TCCGACCGCA TCGTCGTGAT GAACGAAGGG CGCGTCGAGC AGGTCGGCAC GCCGCTTGAG ATTTACAACT ATCCGCGCAC GCGTTTCGTC GCGTCGTTCG TCGGCACGCT GAATATCCTG TCGGGCCATG TGATCGACCC GTCGTCGGGA CGCATGGCCG TCGACGGTCA GGAACTGCAC ACCACGCAAG CCTTGCCCGC CGACGACGCC GGCAAGAAGC GCATGCTTGC CGTGCGACCC GAGGCGATCG TGCTGGAGCC GCCCGCTGCG GGCCGCAACA CGCTGACGGC GACGGTCGAA GAGGTGAGCT TCCTCGGCGC GATCGTGCGC ATCCGCACGC GCGTGAAAGA CGAGGTCGTG TCGCTCGATA TTTTCAACGA CCCGAATCGC CGCTTGCCCG AACGCGGCCA GCCGGTGGCG CTGGGTTTCT CGCACGAGAA TCTGCTGGTT CTCGAAGAGG GTGCGCAGGC CCAGGGTTAG
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Protein sequence | MAFLEIDSLH KAFGANTALH HFDMKIERGE FITFLGPSGC GKTTVLRMIA GFETPTRGTI RLDGRDVTHL RTRQRKVGMV FQAYALFPNM TVAQNIGFGL KIANRPQSEI KQRVDEMLQL IKLPHLGERY PWQLSGGQQQ RVALARALAG KPQVLLLDEP LSALDAKIRI SLRQDIRALQ RELGITSIFV THDQEEALSI SDRIVVMNEG RVEQVGTPLE IYNYPRTRFV ASFVGTLNIL SGHVIDPSSG RMAVDGQELH TTQALPADDA GKKRMLAVRP EAIVLEPPAA GRNTLTATVE EVSFLGAIVR IRTRVKDEVV SLDIFNDPNR RLPERGQPVA LGFSHENLLV LEEGAQAQG
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