Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_0197 |
Symbol | |
ID | 6241699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 221102 |
End bp | 222295 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642591959 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001856436 |
Protein GI | 186474966 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGAT ACGGGACGTT TGCATTTTCA AGCTCGCGCC ACAGCGCTTC GAAGCGGCGC ACGATGCTCG CCGCCGCGCT TTCCGCTTTG CCGGGAGTCG CGCTCGCTCA GGTGAAGATC GGCCTTGTGC TGTCGCTGAC GGGACCGGCT GCATCGCTCG GCATTCCGGC GCGCGATACC GCGACGCTGT TTCCGAAAGA GATCGCCGGT CAGAAAGTCG ATTACATCGT GCTCGACGAT GCGTCCGATA CGACACAAGC CGTACAGGAC ACGAAAAAGC TCATTTCCGA ACATCACGTC GATGCGATCA TCGGCTCGTC AATCACGCCG AACTCGCTCG CGATGATCGA CGTCATTGCC GAAGGTGAAA CGCCCGCGAT CTCGCTGGCG TCGTCGGCGA AGATCATCGA GCCCGTCGAC GCTAAACGGC GCTGGATGTT CAAGACCCCG CAGACGGACG CGATGATGGC CTCCGCGATC ACCGGGCACG CGAGCCAGCA TGGCGTGAAG ACGCTTGCGT ACATCGGTCA GGCGGACGCG CTCGGCGAAA CCTTCTATGC GGAAGTCGCG AAGTTCGCGC AGATTCACCA CATCGGCGTG GTGGCCAACG AGCGATTCAA TCGCACGGAC CCGAGCGTCA CCGGCCAGAT TCTGAAGATC ATGGCGGCGA ACCCGGATGC TGTCGTCGTG GGCGCGGCGG GCACGCCGGC CGCGCTGCCG CCGAAGACGC TGATCGGCCG TGGCTACAAG GGCAAGATCT ATCACAACCA CGGCGTGGGC AATAACGACT TCCTGCGCGT GTGCGGAACC GACTGCAACG GCACCTTCCT GCCCGCGAGC CCGGTGCTCG TCGCAGCGCA GCTCCCTTCG GACTATGCTT CGAAGCGTCT GGCGCTCGAT TACATCGCGC GCTTTGAGAA GCTGCGCGGT CCGGGCAGTG TGTCGGCGTT CGGCGCCTAT GCGTGGGACG CGAGCATGCT GCTCGACAAC GCGATTCCCA TTGCTCTGAA AGCGGCCGCG CCCGGCACGG CCGAGTTTCG CCGCGCGCTG CGCGATGCGC TGGAAGCGAC GAAAGGACTG GCCGACACGA ACGGTGTCGT CAACATGAGC GCGACCGATC ACCTTGGCCT CGATCAGCGC GCGCGCGTGA TGGTCGAGAT CAGCAACGGC AAGTGGGTAT ATCAGCCGCG CTGA
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Protein sequence | MPRYGTFAFS SSRHSASKRR TMLAAALSAL PGVALAQVKI GLVLSLTGPA ASLGIPARDT ATLFPKEIAG QKVDYIVLDD ASDTTQAVQD TKKLISEHHV DAIIGSSITP NSLAMIDVIA EGETPAISLA SSAKIIEPVD AKRRWMFKTP QTDAMMASAI TGHASQHGVK TLAYIGQADA LGETFYAEVA KFAQIHHIGV VANERFNRTD PSVTGQILKI MAANPDAVVV GAAGTPAALP PKTLIGRGYK GKIYHNHGVG NNDFLRVCGT DCNGTFLPAS PVLVAAQLPS DYASKRLALD YIARFEKLRG PGSVSAFGAY AWDASMLLDN AIPIALKAAA PGTAEFRRAL RDALEATKGL ADTNGVVNMS ATDHLGLDQR ARVMVEISNG KWVYQPR
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