Gene Bphy_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0197 
Symbol 
ID6241699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp221102 
End bp222295 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content64% 
IMG OID642591959 
Productextracellular ligand-binding receptor 
Protein accessionYP_001856436 
Protein GI186474966 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGAT ACGGGACGTT TGCATTTTCA AGCTCGCGCC ACAGCGCTTC GAAGCGGCGC 
ACGATGCTCG CCGCCGCGCT TTCCGCTTTG CCGGGAGTCG CGCTCGCTCA GGTGAAGATC
GGCCTTGTGC TGTCGCTGAC GGGACCGGCT GCATCGCTCG GCATTCCGGC GCGCGATACC
GCGACGCTGT TTCCGAAAGA GATCGCCGGT CAGAAAGTCG ATTACATCGT GCTCGACGAT
GCGTCCGATA CGACACAAGC CGTACAGGAC ACGAAAAAGC TCATTTCCGA ACATCACGTC
GATGCGATCA TCGGCTCGTC AATCACGCCG AACTCGCTCG CGATGATCGA CGTCATTGCC
GAAGGTGAAA CGCCCGCGAT CTCGCTGGCG TCGTCGGCGA AGATCATCGA GCCCGTCGAC
GCTAAACGGC GCTGGATGTT CAAGACCCCG CAGACGGACG CGATGATGGC CTCCGCGATC
ACCGGGCACG CGAGCCAGCA TGGCGTGAAG ACGCTTGCGT ACATCGGTCA GGCGGACGCG
CTCGGCGAAA CCTTCTATGC GGAAGTCGCG AAGTTCGCGC AGATTCACCA CATCGGCGTG
GTGGCCAACG AGCGATTCAA TCGCACGGAC CCGAGCGTCA CCGGCCAGAT TCTGAAGATC
ATGGCGGCGA ACCCGGATGC TGTCGTCGTG GGCGCGGCGG GCACGCCGGC CGCGCTGCCG
CCGAAGACGC TGATCGGCCG TGGCTACAAG GGCAAGATCT ATCACAACCA CGGCGTGGGC
AATAACGACT TCCTGCGCGT GTGCGGAACC GACTGCAACG GCACCTTCCT GCCCGCGAGC
CCGGTGCTCG TCGCAGCGCA GCTCCCTTCG GACTATGCTT CGAAGCGTCT GGCGCTCGAT
TACATCGCGC GCTTTGAGAA GCTGCGCGGT CCGGGCAGTG TGTCGGCGTT CGGCGCCTAT
GCGTGGGACG CGAGCATGCT GCTCGACAAC GCGATTCCCA TTGCTCTGAA AGCGGCCGCG
CCCGGCACGG CCGAGTTTCG CCGCGCGCTG CGCGATGCGC TGGAAGCGAC GAAAGGACTG
GCCGACACGA ACGGTGTCGT CAACATGAGC GCGACCGATC ACCTTGGCCT CGATCAGCGC
GCGCGCGTGA TGGTCGAGAT CAGCAACGGC AAGTGGGTAT ATCAGCCGCG CTGA
 
Protein sequence
MPRYGTFAFS SSRHSASKRR TMLAAALSAL PGVALAQVKI GLVLSLTGPA ASLGIPARDT 
ATLFPKEIAG QKVDYIVLDD ASDTTQAVQD TKKLISEHHV DAIIGSSITP NSLAMIDVIA
EGETPAISLA SSAKIIEPVD AKRRWMFKTP QTDAMMASAI TGHASQHGVK TLAYIGQADA
LGETFYAEVA KFAQIHHIGV VANERFNRTD PSVTGQILKI MAANPDAVVV GAAGTPAALP
PKTLIGRGYK GKIYHNHGVG NNDFLRVCGT DCNGTFLPAS PVLVAAQLPS DYASKRLALD
YIARFEKLRG PGSVSAFGAY AWDASMLLDN AIPIALKAAA PGTAEFRRAL RDALEATKGL
ADTNGVVNMS ATDHLGLDQR ARVMVEISNG KWVYQPR