| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0183 |
|---|
| Symbol | |
|---|
| ID | 6241685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 203927 |
|---|
| End bp | 205525 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642591945 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001856422 |
|---|
| Protein GI | 186474952 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTCA AGTTGCTTGC CGCCGCCGCG ACGTTGACGG CCCTCGCCAT CGCGCCTGCG
CTGTCCGTCG CGAAGCCGCT CACCGTTTGT ACGGAATCGA GCCCGGACGG CTTCGACGTC
GTCCAGTACA ACTCGCTCGT CACGACCAAT GCATCGGCCG ATGTGATCTT CAATTCGCTC
GTGTCCTACG ACGAGGCGGC AAAGAAAGTC GTGCCGTCGC TCGCCGATAA ATGGGACGTG
AGCGCCGATG GCCTTACCTA CACGTTCCAC CTGCGCCCGA ACGTGCAATT CCAGACCACC
GACTACTTCA AGCCGACGCG CGCGCTGAAC GCCGACGACG TCGTATTCAC CTTCGACCGC
ATGCTCAACG AGAGCAACCC GTGGCACAAG GTGACGGGCG CGAGCGGTTT TCCGCATGCG
CAGTCGATGG GCCTCGTGAA ACTGATCAAG TCGGTATCGA AAGTCGACGA CAACACGGTC
AAGTTCGAGC TGAACGAGCC GAACGCGACC TTTGTGTCGA TCCTGACGAT GGGTTTCGCG
TCGATCTACT CGGCCGAATA CGCAGACCAG CTGCTCAAGG CCGACAAGAC AGCCGACCTG
AACGCGAAGC CGATCGGCAC CGGTCCGTTC GTGCTGAAGA CCTACACGAA AGATTCGATC
ATCCGCTATG ACGTGAACCC GACCTACTGG GGAACAAAGC CGAAGATCGA GCGGCTGATC
TACGCGATCA CGCCCGACGC CGCCGTGCGC GCGCAAAAGG TGAAGGCCGG CGAATGCCAG
ATTGCGCTGT CGCCCAAGCC GCTGGACGTC GCCGATGCGA AGAAGGACAA GTCGCTCGCC
GTCGTGCAGA CGCCCGCTTT CATGACGGCG TTCGTCGCGT TGAACACGCA GAAAAAGCCA
CTCGACAACC AGAAAGTACG CGCCGCGCTG AACATGGCGT TCGACCGCAC GTCGTATCTG
AAGGCTGTGT TCGATAACAC CGCGACGCCC GCGAACAATC CGTACCCGCC GAATACGTGG
AGCTACAACA AGGCCGTCAA GCCTTGGCCA TACGACACCG AAAAGGCCAA AAAGCTGCTT
GCCGAAGCGG GCTATCCGAA CGGCTTCGAA ACGACGATCT GGGTACGTCC GAACGGCAGC
GTGCTGAATC CGAATCCGAA GGCGGGCGCG GAAATGCTGC AGGCGGACTT CGCGAAGATT
GGTGTGAAGG CCGAGGTAAA AGTGATCGAA TGGGGCGAGC TGATCAAGCA GGCCAAGCAG
GGACAGCACG ACACGCTGTT CATGGGCTGG GCCGGCGACA ATGGCGACCC GGACAACTAT
CTGTCGCCGC TCTTCAGTTG CAACGCTGTC AAGTCGGGGA TCAACTTCGC GCGTTACTGC
GACCCGGAAC TCGACAAGCT GATCGCCCAA GGCAAGGAAA CCGCCGATCA GAGCAAGCGC
ACCAAAGCGT ATGAAGCCGC GCAGCAGGTC ATCCACGACG AAGCGCTGTG GATTCCGCTC
GGTTATCCGA CGGCAGCGGC CATTACGCGC ACGAACGTCA GCGGGTATCG CGTCAGTCCT
TTCGGGCGCC AGAACTTCGG CGCTGTAACG GTGCAGTAA
|
|---|
| Protein sequence | MRFKLLAAAA TLTALAIAPA LSVAKPLTVC TESSPDGFDV VQYNSLVTTN ASADVIFNSL
VSYDEAAKKV VPSLADKWDV SADGLTYTFH LRPNVQFQTT DYFKPTRALN ADDVVFTFDR
MLNESNPWHK VTGASGFPHA QSMGLVKLIK SVSKVDDNTV KFELNEPNAT FVSILTMGFA
SIYSAEYADQ LLKADKTADL NAKPIGTGPF VLKTYTKDSI IRYDVNPTYW GTKPKIERLI
YAITPDAAVR AQKVKAGECQ IALSPKPLDV ADAKKDKSLA VVQTPAFMTA FVALNTQKKP
LDNQKVRAAL NMAFDRTSYL KAVFDNTATP ANNPYPPNTW SYNKAVKPWP YDTEKAKKLL
AEAGYPNGFE TTIWVRPNGS VLNPNPKAGA EMLQADFAKI GVKAEVKVIE WGELIKQAKQ
GQHDTLFMGW AGDNGDPDNY LSPLFSCNAV KSGINFARYC DPELDKLIAQ GKETADQSKR
TKAYEAAQQV IHDEALWIPL GYPTAAAITR TNVSGYRVSP FGRQNFGAVT VQ
|
|---|
| |