Gene Bphy_0165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0165 
Symbol 
ID6241667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp184342 
End bp185268 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content64% 
IMG OID642591927 
Producthydroxymethylglutaryl-CoA lyase 
Protein accessionYP_001856404 
Protein GI186474934 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATGC CACAAGCAGT GAAGATCGTC GAAGTCGGTC CGCGTGACGG ACTGCAGAAC 
GAAAAGGAAT TCGTGCCGAC GGAGGTCAAG ATCGAGCTGA TCAACCGACT GTCGGCGGCT
GGCTTCCGCA ATGTCGAGGC GGCGTCGTTC GTGTCGCCGA AATGGGTGCC GCAGATGGCC
GACGGCGCCG ATGTGATGGC AGGCATCGCG CGCCGTCCGG GCACCATTTA CTCGGTGCTG
ACGCCGAACC TGCGTGGCTT CGAAGGCGCC GTCGCCGCGC ACGCCGACGA GATCGTGATC
TTCGGTGCGG CCAGCGAAGC GTTCTCGCAG AAGAACATCA ATTGCAGCAT CGCCGAAAGC
ATCGAGCGCT TCGTGCCCGT CGCGCAAGCC GCAAAGGAGA AAGGCATCCG CATTCGCGGC
AGCGTGTCCT GCTCGCTCGG CTGTCCGTAC CAGGGCGAAG TGCCCGTTGC GTCCGTGGTC
GACGTGGTCG AGCGCTTTGC AGCCCTCGGC TGCGACGAGA TCGATATCGC CGACACGATC
GGTGTCGGCA CGCCCAAGCG CACGCGCGAA GTATTCGCCG CCGTCACGCA AGTATTCCCG
CGCGAGCGTC TGTCGGGTCA TTTCCACGAC ACCTACGGCC AGGCGCTCGC GAACATCTAT
GCGGCGTTGC AGGAAGGCAT CGAGATCTAT CATGCGTCGG TGGCGGGGCT AGGCGGCTGT
CCGTACGCCA AGGGCGCGAC GGGCAATGTC GCGACGGAGG ACGTGCTGTA TCTCATGAAC
GGCCTCGGTA TCGACACGGG CATCGATCTC GCGCAAGTCG TCGAGATCGG CGATTTCATC
TCGACCTCGA TCGGCCGGCC GAACGTGTCG CGCGCGGGGA AGGCGCTGCT GGCGAAGGCG
CGCAGCGAAA AGACCAACTG CGTTTGA
 
Protein sequence
MAMPQAVKIV EVGPRDGLQN EKEFVPTEVK IELINRLSAA GFRNVEAASF VSPKWVPQMA 
DGADVMAGIA RRPGTIYSVL TPNLRGFEGA VAAHADEIVI FGAASEAFSQ KNINCSIAES
IERFVPVAQA AKEKGIRIRG SVSCSLGCPY QGEVPVASVV DVVERFAALG CDEIDIADTI
GVGTPKRTRE VFAAVTQVFP RERLSGHFHD TYGQALANIY AALQEGIEIY HASVAGLGGC
PYAKGATGNV ATEDVLYLMN GLGIDTGIDL AQVVEIGDFI STSIGRPNVS RAGKALLAKA
RSEKTNCV