| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0140 |
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| Symbol | |
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| ID | 6241643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 155217 |
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| End bp | 156491 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642591903 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001856380 |
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| Protein GI | 186474910 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.537566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTG CGCAACAGGA AAAAACCACG GTGCCGCACG GCTTCGAGCT CAGCATGACC
TCGGGCCTGC AGCGCTATTC GGTGCAACAC GGCGAGCTGA CGCTCACGAG CGTCTTCCAG
CCGATATTCA GTCTGTCGCA CATGCGTGCC GTGGGCTATG AAGGCTTGTT GCGCGCGCAT
GACCCGTTCG ACCGTGCCGT GTCGCCCGTC GATGTGTTCG GCCACGCGGC GCGCGTCGGC
GATGTGCTGC ATGTCGACCG GCTCGCGCAG TCGCTGCATC TCGAGAACTT CAAGGTGCTC
GGCGCGGAGC GCGAGTGGCT GTTTCTGAAC GTCCATCCGG GCGTGCTGAT CGACTCGTAT
CATTCGGCTG CACTGCTCGC AAATTTGCGT CGTTTGAACC TGTCGCCGCG CCGCATCGTG
CTCGAAGTGC TCGAACAGAG CGCGGAAGAT ATCGAACGTC TTGCCGACGC CGTGCGCCAG
TTCCGCGAGC GCGGCTTTCT GATCGCGCTC GATGACTTCG GCGCGGGGCA TTCGAATATC
GAACGCATCT GGCAGCTCAA TCCCGACATC GTCAAGCTCG ATCGCATCAT GCTGTCGCAC
GCGGCGCATC GTGCGGATGT CGCGTCGATT CTGCCCGGGC TCGTCGCATT GCTGCACGAG
GCGGGCAAGC TGGTGCTGAT CGAAGGCGTC GAGACGGAGC ACGAAGCGCA CATGGCAATG
GAGTGCAATG TCGATTTCGT GCAGGGTTTT TTCTTTGGGC GTCCGCATCC TGGTCTCGCG
GACGCCGCGC ACGCGGCCGC CTGCATCGGC GAGCTGACCG AGCGTTATCA GACGCAAACG
GAACAGCGCG AGCGACGCAA CGCGTCGCGG CTCGCGCCAT ACATTCGCGC ATTCGAGCGC
GCGGCGGAAC GGCTTGCCGC GGGTGAACTG CTCGATGAAG TGTGCTGGAA TTTTCTCGCG
CTCGATCACG CGGCGCGCTG CTATCTGCTC GACGACAAGG GCCGTCAGGC GGGACGCAAC
GTGGTGTTGC GCGCGGACCG CGCGTCGCAC GAAACGCGCT TCCTGCCGCT ATCCGATGCG
CAGGGCGCGA ACTGGCTGCG CCGGCCGTAT TTCCGCGCGG CAATCGAGGC ACCTGAACGC
GTGCATGTGA CGCGGCCTTA TCTGTCGATT AACGAAGCGG TGCCCTGCGT CACGTTGTCG
GTGGCGACGC AGATCGGCAG TCGCATGTGC GTGCTGTGCG GCGATATCGA CTGGTTCGAG
GAGCCGCACT TCTGA
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| Protein sequence | MTIAQQEKTT VPHGFELSMT SGLQRYSVQH GELTLTSVFQ PIFSLSHMRA VGYEGLLRAH
DPFDRAVSPV DVFGHAARVG DVLHVDRLAQ SLHLENFKVL GAEREWLFLN VHPGVLIDSY
HSAALLANLR RLNLSPRRIV LEVLEQSAED IERLADAVRQ FRERGFLIAL DDFGAGHSNI
ERIWQLNPDI VKLDRIMLSH AAHRADVASI LPGLVALLHE AGKLVLIEGV ETEHEAHMAM
ECNVDFVQGF FFGRPHPGLA DAAHAAACIG ELTERYQTQT EQRERRNASR LAPYIRAFER
AAERLAAGEL LDEVCWNFLA LDHAARCYLL DDKGRQAGRN VVLRADRASH ETRFLPLSDA
QGANWLRRPY FRAAIEAPER VHVTRPYLSI NEAVPCVTLS VATQIGSRMC VLCGDIDWFE
EPHF
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