Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_0113 |
Symbol | |
ID | 6241616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 122916 |
End bp | 123914 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642591875 |
Product | transcription factor jumonji domain-containing protein |
Protein accession | YP_001856353 |
Protein GI | 186474883 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGATG ACGAATGGCG GCGCTGGATC GCCGAGAACC TGTTGCTCGA CGCATCGCCC GAACACGTGC ATGCGGTGCT CATCGAACAC GGCTTCGAGC GCGAACACGC ACTATGCGAA ATCGATAGCA CGCTGAATAG CCCTTATTTT CTTGCGGGCG CCCGCTTGCG CAATCGTTTG CGCAAGCGTG AATGGATGTT TTCCGTGTAC GGCGAGCTGA ATCGCATGCG GCGGGGAGCG GATGAGATTG AACGTCACGC GGGTCTGTCG CGTGATGCGT TTTACGAGCA GTTCTATTTT CAGAACCGGC CAGTGATCGT CACCGGCATG ATCGATTCGT GGCCAGCCCG CAGACGCTGG AATTTCGACT ACTTTCGCGC GCGGTGCGCG CGTGCCGAGG TGGAAGTGCA GTTCGGCCGC GAAGCCGATG CGAACTACGA GATCAATCAG CCGTCACACA GGCGCGCGAT GCGTTTTGGC GACTACGTCG ATCTCGTCGA ACGCGCCGGC GTCACGAACG ACTTCTATAT GACGGCGAAC AACGCGTCGC GAAACCGAGT GGCGCTGGCG GCGTTGTGGG ACGACGTACC GCCTATCGGC GAGTATCTGG ATGCCGCGGC TGCCGATGCG GGCTATTTCT GGTTCGGGCC CGCCGGCACA AAGACGCCGT TTCACCACGA TCTCACCAAC AATCTGATGG CGCAGGTAAT CGGGCGCAAG CGCGTGCTAC TCGTGCCGTT CACCGACACC GCCCATATGT ACAACCATCT GCATTGCTAT TCGCAGGTTG ATGGTGGGGC GCTCGATGTC GAACGGTTTC CGTCATTCGA ACAGGCGCAC GTGATCGAGT GCACGCTGGA ACCGGGCGAA CTGCTGTTTC TCCCGATCGG CTGGTGGCAT TACGTCGAGG CGCTCGATGC CTCCGTCACG ATGACGTACA CGAGTTTTCT CGAACGCAAC GACTTTGCGC GCACGTACAG CACGTATCGC GAGCTTTGA
|
Protein sequence | MIDDEWRRWI AENLLLDASP EHVHAVLIEH GFEREHALCE IDSTLNSPYF LAGARLRNRL RKREWMFSVY GELNRMRRGA DEIERHAGLS RDAFYEQFYF QNRPVIVTGM IDSWPARRRW NFDYFRARCA RAEVEVQFGR EADANYEINQ PSHRRAMRFG DYVDLVERAG VTNDFYMTAN NASRNRVALA ALWDDVPPIG EYLDAAAADA GYFWFGPAGT KTPFHHDLTN NLMAQVIGRK RVLLVPFTDT AHMYNHLHCY SQVDGGALDV ERFPSFEQAH VIECTLEPGE LLFLPIGWWH YVEALDASVT MTYTSFLERN DFARTYSTYR EL
|
| |