| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0110 |
|---|
| Symbol | |
|---|
| ID | 6241613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 118619 |
|---|
| End bp | 120133 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642591872 |
|---|
| Product | amidase |
|---|
| Protein accession | YP_001856350 |
|---|
| Protein GI | 186474880 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAATCCG ACTATCTCGA TCATGACGCA ATCGGTCTCG CCGATCTGGT ACGCAAGCGC
AAGGTGAGCG CGCGCGAATT GCTGGAGACC GCGATCGCGC GGGCCGAAGC AGTGAATCCC
GCCATCAACG CGATCGTCCT GAAAGACTAC GAGGCCGCCC GCCGACGCGC ATCGCGCGAA
CGGACAAACG GCAGCGGCGA AGCACCCGAC GCCGCTGCGC TCGGCGACGG GCCGCTCGCG
GGCGTACCGT ATCTGGTGAA GGATCTCGGT CTGGCCGTCA AAGGGCTGCG CATGTCGATG
GGCAGCCGCC ACTATCGCCA TTACATTCCC GCCGAAGACG CGCCCATCGT CACGCTGACG
CGCGCCGCCG GACTCAATAT TTTCGGCAAG ACCAGCACGT CCGAAATGGG GCAGATGCCT
TATACGGAGC CCGAACTGTT TGGACCATGC CGCAACCCGT GGAGTCTCGA TCACACACCG
GGCGGTTCGA GCGGCGGCTC GGCTGCCGCC GTCGCCGCGG GCATCGTGCC GCTCGCGCAT
GCATCGGACG GCGGCGGCTC GATCCGCATT CCCGCGTCAT GCTGCGGCCT GTTCGGGCTC
AAGCCGACGC GCGGACGCCA GCCGTCGAAT GCGGTGCCGG CGCCCGGCGA TATGGGCGTC
GATCACGCCG TGTCGCGCAG CGTGCGCGAC AGCGCACTGC TGCTCGATCT TACGTCGGGC
AATGCCGGCC GGCCGATGGG CGCGCCGGGC ACCTTCCTCG CCGCGACGGG TGAACCGTGC
AAGCCGCTGC ACATCGCGTT CGTGACGGAC CCGATGCTCG CATTCACATT GTCCGCCGAC
GCCCGCGCCG CTCTCGACGA CGCCGCGCAA CTCGCGGCAT CGCTCGGTCA CCACATCGAA
CCCGTCACGC TCAACATCGA CTTCGCGAGC CTGCGCGAAG CGTTTCTGAT GATCTGGTCG
GTGAGCGCCG AGAACCTCGT GCTGCACGCC GACCAGATCA CGGGGCGCAA GCCGAATCGT
GAGGAATTCG AAATCGCGAC GTGGGCGATG GGGCACATCG GCCGCAAGTT CGGCGAGCGG
GAATTGCCCG CGGCACTCGA AGCGCAACGC CAGATCAGTG CGAAACTTGC CGAGCTGATG
ACGCGTTACG ACGTGATCCT GTGCGCAACG CTCGCCGCCG CGCCGATCAA GATCGGCGAA
ATGCAACCGA GCGCCGTCGA GAAAATGCAG ATGCGCGCCG TCACCACGGT TCCCGTCGAG
CCGCTGATGC GCAAGCTGCT GACAGAAGTG TCGAACAAGG CGTTCGCGTG GGCGGGCTGC
ACGGAGCTGT TCAATATGAC GGGACAGCCG GCGATGTCGG TGCCGCTCTA TTGGAATGCG
CGCGGCCTGC CGATCGGCGT GCAATTCGCC ACACGGGAAG GCGGCGAAGC GCTGCTGCTG
CGGCTCGCCG CGCAACTGGA AACGGCGCGT CCGTGGTTCG ACCGGCGGCC GCCGCTGATC
CCCGCGAGCA GCTAG
|
|---|
| Protein sequence | MQSDYLDHDA IGLADLVRKR KVSARELLET AIARAEAVNP AINAIVLKDY EAARRRASRE
RTNGSGEAPD AAALGDGPLA GVPYLVKDLG LAVKGLRMSM GSRHYRHYIP AEDAPIVTLT
RAAGLNIFGK TSTSEMGQMP YTEPELFGPC RNPWSLDHTP GGSSGGSAAA VAAGIVPLAH
ASDGGGSIRI PASCCGLFGL KPTRGRQPSN AVPAPGDMGV DHAVSRSVRD SALLLDLTSG
NAGRPMGAPG TFLAATGEPC KPLHIAFVTD PMLAFTLSAD ARAALDDAAQ LAASLGHHIE
PVTLNIDFAS LREAFLMIWS VSAENLVLHA DQITGRKPNR EEFEIATWAM GHIGRKFGER
ELPAALEAQR QISAKLAELM TRYDVILCAT LAAAPIKIGE MQPSAVEKMQ MRAVTTVPVE
PLMRKLLTEV SNKAFAWAGC TELFNMTGQP AMSVPLYWNA RGLPIGVQFA TREGGEALLL
RLAAQLETAR PWFDRRPPLI PASS
|
|---|
| |