| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0066 |
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| Symbol | |
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| ID | 6241570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 74789 |
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| End bp | 76426 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642591829 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001856307 |
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| Protein GI | 186474837 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.152932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAACA CATCACTTGA TCCACATCAA GTTCTTTTGG ATTCCTTCCA GACCTTTCTG
CGTCACGCTG TCGCAGCGCA AGACCAGAAC GACGGCGCTG CACGTGACAT CTGGCTTCGG
GCCGCTGCGC ATCTGTTCCC GATGGATGCC GGTTCTCTCG CCGAACTGAA CCTGCAACTG
CTGACCGGGC AACACGCCGT CGAAGCAGAA GCGATCGCCC GGGCTTGTGC GGCACTCGCT
CCGCGCGATC CCAAAACGCA CTTTCAACTC GGGCTCACCC TGCAACTGAT GAACCGGCAC
AGCGACGCCA TCGCGCCCTA CCGCGAGGCG CTCGCCATCG ATCCCGATCT GCCAAGCCTG
CGTAACAATC TTGCTGCCGC GTTGATGTCG GCGAATCCTG CTTCACCGGA AGTGGCTGTC
TTGCTGACCG CCGCGATCGA ACGGAGCCCC GACGACGCGA ACGCGTGGAT CAATCTCGCC
AAATCGCGTC TTGCGGGCTT CGACCTCGAC GGCGCCCTCG AGGCCGAGCA GCGCGCGATT
CTGCTTCAGC CCGACACTCC CGTCGCGCTC GGCAATCACG GACAGACATT GCGTGAAGCG
CAGCAATGGG AAGACGCCGA ACGCTTCACA TCCGCGGCAC ATCGGGCTGC GCCCAGCAAT
GCTTCGTTCA TGTCCAATCT CAGCATGCTG CACCTGCTGC GCGGCAACTA CGCGGACGGC
TGGCTCGAAC ATGAGGCTCG TTGGGACGGA TCAAAGGAAC TGGCGGGCAA GCGTCCCGTC
ATGCCAGGGC CGAAGTGGTG CGGTGAATCG CTCGCCGGCA AGACGCTGCT GCTCTGGGGC
GAGCAGGGTA TGGGCGACCT GCTGCAGTTC TGCCGCTACG TTCCGTTGCT GGCCGAGCGT
GTGCATCGCC AGGGCGGTCG GCTCGCATGG AATTCGTTCC CGCAGATGGG CCCGCTGCTC
GCACGCACGC TTGCGCAATA TGCCGATGAG TTCACCCTCG GTGGCAGCGT CGAAAGCTTG
CCGAAATTCG ACTATGAAAT CTCGCTGCTG TCGCTGCCTT TGCTGTTCGA TACGCGGGAA
GAAACGATCC CGTCCACTGT TCCCTATTTG CGAGCGGATC CGCAACGCGT GGACGCATGG
CGCGAGCAAC TCGCCGGAGA GAAGCGCCTC AAGGTCGGAC TCGTCTGGAC GGGCAGCCAC
GGACATCAAC GCAACCCGTA CCGGCGCGTC GGGCTGGAAC GCTACGTCGA TTACTTTCGC
GAACTCGACA ACGCTGCGTT CTATTCGCTG CAGCCGGGCG CCGGAGCCGA AGTGGCGGCG
GCGCGTACAG CCGGGCTCGA TATCGCCGAT CACACGGCAG CGTTCAAGAC CTTCGACGAC
ACCGCCGCGT ACGTCAGCGC GCTCGATCTG GTGATTACCG TGTGCACGTC GGTCGCCCAC
TTGAGCGGCG CGCTGGGGCA GCGCACGTGG GTGCTGCTCG ATGTCAATCC GCATTGGGTC
TGGCTGCTCG ATCGCGCCGA CAGCCCGTGG TATCCCAGTG CAACCTTGTA CCGGCAAGCG
CAGTTCGCGC AGTGGGAGCC GGTGTTCGAC AAACTGACAC GCGATCTCGC CGCACTGGCG
GATTCGCGTC GCCCGTAG
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| Protein sequence | MLNTSLDPHQ VLLDSFQTFL RHAVAAQDQN DGAARDIWLR AAAHLFPMDA GSLAELNLQL
LTGQHAVEAE AIARACAALA PRDPKTHFQL GLTLQLMNRH SDAIAPYREA LAIDPDLPSL
RNNLAAALMS ANPASPEVAV LLTAAIERSP DDANAWINLA KSRLAGFDLD GALEAEQRAI
LLQPDTPVAL GNHGQTLREA QQWEDAERFT SAAHRAAPSN ASFMSNLSML HLLRGNYADG
WLEHEARWDG SKELAGKRPV MPGPKWCGES LAGKTLLLWG EQGMGDLLQF CRYVPLLAER
VHRQGGRLAW NSFPQMGPLL ARTLAQYADE FTLGGSVESL PKFDYEISLL SLPLLFDTRE
ETIPSTVPYL RADPQRVDAW REQLAGEKRL KVGLVWTGSH GHQRNPYRRV GLERYVDYFR
ELDNAAFYSL QPGAGAEVAA ARTAGLDIAD HTAAFKTFDD TAAYVSALDL VITVCTSVAH
LSGALGQRTW VLLDVNPHWV WLLDRADSPW YPSATLYRQA QFAQWEPVFD KLTRDLAALA
DSRRP
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