Gene Bphy_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0006 
Symbol 
ID6244581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp7331 
End bp8734 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content61% 
IMG OID642591768 
Productethanolamine transproter 
Protein accessionYP_001856248 
Protein GI186474778 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID[TIGR00908] ethanolamine permease 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.56424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00761028 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACAAG CGTCGACAAC CCAGCACAAA GGAAACGTCA CGCATCATGA ACTGAAGCAG 
ACGCTCGGCA CCTGGCAGCT TTGGGGCATC GCCGTCGGTC TGGTGATTTC GGGCGAATAC
TTCGGCTGGA GCTATGGTTG GGCGAGCGCC GGTACGCTCG GCTTCGTGAT CACCGCGCTC
TTCATTGCCG CGATGTACAC GACGTTTATC TTCAGCTTCA CCGAGCTCAC GACGTCGATT
CCGCACGCAG GCGGCCCGTT CGCATACGCG CGTCACGCGT TCGGCCCCAC AGGTGGCTAC
ATCGCGGGGG CAGCGACGCT GGTGGAGTTC GTGTTCGCAC CGCCCGCTAT CGCGCTGGCG
ATCGGCGCGT ATCTGCATGT GCAGTTTCCC GGTCTTGAAC CGAAGCATGC GGCAATGGGC
GCTTACCTCG TGTTCATGGC GCTGAACATC GTCGGCGTGC AGATAGCAGC GGCATTCGAG
CTTTGCGTGA CATTGCTCGC CATCTTCGAG CTGCTGGTAT TTATGGGCGT CGTATCGCCG
GGCTTCCAAT GGTCGAACTT CGCGAAGGGC GGCTGGGCCG GCTCGGACGC GTTCAACATG
GGTTCGTTTC ACGGTATGTT CGCCGCGATT CCGTTCGCGA TCTGGTTCTT CCTCGCGATC
GAAGGCGTTG CGATGGCCGC CGAAGAAGCG AAGAACCCGA AGCGCTCGAT CCCGATCGCT
TACGTGACGG GCATCCTGAC GCTCGTCGTG CTTGCGATCG GCGTGATGGT GTTCGCGGGC
GCCGCGGGCG ACTGGACGAA GCTCTCCAAC ATCAACGACC CGCTGCCGCA AGCCATGAAA
TACATCGTCG GCGAAAACAG CGGCTGGATG CATATGCTCG TCTGGCTCGG CCTGTTCGGT
CTCGTCGCGT CGTTTCACGG CATCATCCTG GGCTATTCAC GGCAGATCTT CGCGCTGGCT
CGCGCAGGCT ATCTGCCGGA GTGGCTGTCG AAGGTGCATC CGCGCTTCAA GACTCCGCAT
CGCGCGATTC TCGCGGGTGG TGTGGTCGGC ATCGCCGCCA TTTATAGTGA CGAGCTGATC
CAGTTCGGCG GCCAGACGCT GACCGCGAAT ATCGTGACGA TGTCGGTATT TGGCGCTATC
GTGATGTACA TCATCAGCAT GCTGGCGCTT TTCAAGTTGC GCCGCATCGA GCCGAACATG
GAGCGTCCGT TCCGCGCGCC GCTGTTTCCG TACTTCCCGG CGTTCGCACT GGTGGCTGCC
GTGATTTCGC TGGGCACGAT GATCTACTTC AATCTGCTCG TCGCGCTCGT GTTTGCCGCT
TTCCTCGCGC TCGGCTACGG TTATTTCCTG ATGACGCGTC ATCAACGCGA AGCGGCCCCG
GCAGACGTTT TGCTCGAAGA ATGA
 
Protein sequence
MKQASTTQHK GNVTHHELKQ TLGTWQLWGI AVGLVISGEY FGWSYGWASA GTLGFVITAL 
FIAAMYTTFI FSFTELTTSI PHAGGPFAYA RHAFGPTGGY IAGAATLVEF VFAPPAIALA
IGAYLHVQFP GLEPKHAAMG AYLVFMALNI VGVQIAAAFE LCVTLLAIFE LLVFMGVVSP
GFQWSNFAKG GWAGSDAFNM GSFHGMFAAI PFAIWFFLAI EGVAMAAEEA KNPKRSIPIA
YVTGILTLVV LAIGVMVFAG AAGDWTKLSN INDPLPQAMK YIVGENSGWM HMLVWLGLFG
LVASFHGIIL GYSRQIFALA RAGYLPEWLS KVHPRFKTPH RAILAGGVVG IAAIYSDELI
QFGGQTLTAN IVTMSVFGAI VMYIISMLAL FKLRRIEPNM ERPFRAPLFP YFPAFALVAA
VISLGTMIYF NLLVALVFAA FLALGYGYFL MTRHQREAAP ADVLLEE