| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3671 |
|---|
| Symbol | |
|---|
| ID | 6199001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 4163388 |
|---|
| End bp | 4163984 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641707622 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001834712 |
|---|
| Protein GI | 182680566 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3218] ABC-type uncharacterized transport system, auxiliary component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.228354 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCAG AACCGGCTTC CCTTCTTTTG AGCCGAGGCT CATGGCCTGG ACTCTTGCTT
GGCCTGTCTG TGACCTTGGC CGGGTGCGCC TCGGGCCCGC CTCCGACTTT TGATTTGAGT
CCCTCAGCGG GTCCCTTCAG CGTGCGGGCG CAGCGAGGGC AATTGGCGAT TGCGGAACCG
GTCGCGGACG TGCCGATCGA CTCGCAGCGC ATCGTCGTCC GGGTCCAAGA TGATTCCGTT
GCCTTTCTGC GTGGTGCGCA ATGGGCGGAC CGCCTGCCGA GCCTCGTCCA GACACGGCTG
ATCGAAACCT TTGAAAACGC GCATCTCCTG CGCGAGGTCG GCCGCCCGGG CATGGCCGCC
AATTACACGC TTTCGACCGA AATCCGCCGA TTCGAACTTG CCGTCGGGCA AAACCAGGCG
GTGGTCGTCA TTGCCGCGCA ACTCGTCAAC GCCACCGGCA AGATCGTTCA TGGCCGGGTG
TTTTCCGCCA AAGCGCCTGC GGTGCATGAT GATGGCGCGA GCGCTACGGC GGCGCTCGAT
CAGGCGCTCA GTCAGGTGAT GCAGCAGATC GTCGTCTGGG CCGCACCGCT GATCTGA
|
|---|
| Protein sequence | MKSEPASLLL SRGSWPGLLL GLSVTLAGCA SGPPPTFDLS PSAGPFSVRA QRGQLAIAEP
VADVPIDSQR IVVRVQDDSV AFLRGAQWAD RLPSLVQTRL IETFENAHLL REVGRPGMAA
NYTLSTEIRR FELAVGQNQA VVVIAAQLVN ATGKIVHGRV FSAKAPAVHD DGASATAALD
QALSQVMQQI VVWAAPLI
|
|---|
| |