| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3647 |
|---|
| Symbol | |
|---|
| ID | 6198994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 4139295 |
|---|
| End bp | 4140035 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641707598 |
|---|
| Product | flagellar biosynthetic protein FliP |
|---|
| Protein accession | YP_001834688 |
|---|
| Protein GI | 182680542 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
|---|
| TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.313077 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACGTC TACTTATTGT CAGCTTTCTC ATCATTGCCC TGGCACCCGC TGCCTATGCA
CAAGTACCCG ACCTGAGTAC ACTCGTGCCG CCCGGAAATG GAACTGTTTC GGGTCGTATC
ATTCAGCTTG TCGCACTTCT GACCATTCTC TCTGTGGCGC CTGGCCTTTT GGTTATGGTC
ACGAGTTTCA CACGCTTCGC GATTGCTCTT TCGTTCCTGC GTTCAGGTCT CGGCTTGCAA
AGTACTCCCG CCAATCTGGT TCTGATCAGC CTTTCGCTCT TCATGACATT TTACGTCATG
TCACCCGTCT TCGAGAAAGC CTGGGACGGC GGGGTCAAGC CGATGATGGA CAATCAGCTG
ACGGAACAAG AGGCTTTCCC CAAAATAATA CAGCCTTTCA GAGAATTCAT GAGTGGTCAG
GTCCGTGGCA AGGATCTGAA ACTCTTTACT GATTTGGCGA AGGAGAACTT TCCCTCGGTG
GACCAAACGG GTTCGGAAAT AGAATTGCGT ATCCTGATTC CCGCATTCAT GATTTCTGAG
TTGAGGCGTG GATTTGAAAT GGGATTTCTT ATCGTTTTGC CATTTCTCGT CATCGACATG
ATCACATCGG CCATTACCAT GTCGATGGGT ATGATGATGC TGCCTCCGAC AGTCATCGCA
CTCCCAGTCA AGGTTCTTTT CTTCATTCTT ATCGATGGAT GGAACATGCT CATCGGCAGC
CTGGTGCGCT CATATACATA G
|
|---|
| Protein sequence | MKRLLIVSFL IIALAPAAYA QVPDLSTLVP PGNGTVSGRI IQLVALLTIL SVAPGLLVMV
TSFTRFAIAL SFLRSGLGLQ STPANLVLIS LSLFMTFYVM SPVFEKAWDG GVKPMMDNQL
TEQEAFPKII QPFREFMSGQ VRGKDLKLFT DLAKENFPSV DQTGSEIELR ILIPAFMISE
LRRGFEMGFL IVLPFLVIDM ITSAITMSMG MMMLPPTVIA LPVKVLFFIL IDGWNMLIGS
LVRSYT
|
|---|
| |