| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3612 |
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| Symbol | |
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| ID | 6199423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 4096013 |
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| End bp | 4097224 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641707566 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001834656 |
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| Protein GI | 182680510 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.220413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0189387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTAA AACGGTTTGC GGAGGCAGCG GATGATTTTA CCGCTGTCAT TAGACTAAAT
CCAAAGATCG CTGGTTATTA TGACAATCGT CAATACGCTT ACAAAGCACT GAGACTATTG
AAAGAAGCTA TGAAGGATGC AACGGAAGCA GTTCGTCTAG CTCCCACATA TTCATTCGTT
TACCGTAGTC GAGGTTTGTT GCTCACTGAT TTGGAGCAAT ATGATCTTGC AGAGGCAGAT
TTCACAACAG CAATATCTCT TGCTCCTAAA GATGGTGGTC TTTTCGTTGA TCGTGGCAAG
ATGTTTGTGG CGGCTAAAAA AACTCATGAA GCCGTGGCGG ATTTTACTCA TGCCATCGAT
ATGGATGCAA ATAACGCGAT CGCGTTACGC GAACGAGGTC TTGCTTATAA GATGCTTGGT
GATTATGCGG CGGCTACAGC TGATTTAAGC CTATTTGCGC GATTGGAGCC GGGCGACCAA
GAGGTCAACC GTGCGCAGCA CGAAATACAA AACCTACAGA AACTGCCAAA TGCCGTAACG
TCTCCACCTG CGAGGTTGCC GGAAGCGAAG AATTCGGACG CTGACAAAAA TGGCTCGTCA
GGTACTGGAT TCTTTGTATC GCCGAGAGGC TATATAGTTA CCAACGCTCA TGTCGTTAAC
GGTTGCAAGG ATGTGCAGAT AACGTCGGGG TTGTCGCCAA AGATATCTGC TCGAATCTTG
ACCCAAGATT CGGCAAATGA TCTCGCGTTG TTGAAAAGTG ACTTGCGACC TAATACGTTG
GTTCCACTCA GAGTTGGTGT GCGGATCGGC GAGAACGTTG CTGTATTTGG TTTTCCTTTA
ATCGGGCTAC TTGCAACGAG TGGGAATTTT TCTGTTGGTA TTGTTTCTGC TCTTGCAGGT
CTTGGAGATG ATACGCGCTA TCTGCAGATA TCTGCCCCAG TTCAGCCGGG TAATAGTGGT
GGTCCCGTGC TCGATCAAAG TGGAAACATT GTGGGCGTGG TGGTAGCAAA GCTGGATGCC
ATAAACGTCG CTGCGATTAC TAAAGACGTC CCTCAGAATG TAAATTTCGC AATCAAGACA
AGCGTGTTGA CGAATTTACT TGATGCCAAT GGAGTGGACT ACTCAACTGG GAGTGCAGGA
CAGTTTTTGC AATCGGCCGA TCTCGCGGAG CGAGCAAAAT CCATTGCTGT GCTGATCGAA
TGTGGTCCAT AA
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| Protein sequence | MDLKRFAEAA DDFTAVIRLN PKIAGYYDNR QYAYKALRLL KEAMKDATEA VRLAPTYSFV
YRSRGLLLTD LEQYDLAEAD FTTAISLAPK DGGLFVDRGK MFVAAKKTHE AVADFTHAID
MDANNAIALR ERGLAYKMLG DYAAATADLS LFARLEPGDQ EVNRAQHEIQ NLQKLPNAVT
SPPARLPEAK NSDADKNGSS GTGFFVSPRG YIVTNAHVVN GCKDVQITSG LSPKISARIL
TQDSANDLAL LKSDLRPNTL VPLRVGVRIG ENVAVFGFPL IGLLATSGNF SVGIVSALAG
LGDDTRYLQI SAPVQPGNSG GPVLDQSGNI VGVVVAKLDA INVAAITKDV PQNVNFAIKT
SVLTNLLDAN GVDYSTGSAG QFLQSADLAE RAKSIAVLIE CGP
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