| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3608 |
|---|
| Symbol | |
|---|
| ID | 6198491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 4091690 |
|---|
| End bp | 4092907 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641707562 |
|---|
| Product | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase |
|---|
| Protein accession | YP_001834652 |
|---|
| Protein GI | 182680506 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0299013 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACTG AAATCCGCGT CCCCACTTTG GGAGAATCTG TGACCGAGGC GACGATCGGT
AAATGGTTCA AGAAGGCGGG CGATGCCGTC AAGGCGGACG AGCCGCTGGT CGAACTCGAA
ACCGATAAAG TCACGCTCGA AGTCAATGCG CCAGCCGCTG GCGTGCTCGG TGAGATCGTT
GCCAAGGATG GCGACACGGT TGGCGTCGGT GCCCTGCTCG GACAGATCGT CGAAAGCGGC
GCTGGCGCCG CGCCGGCCGC GGCCAAGCCT GCTGCTCTTG CACCTGCTCC CACTCCTGCC
GCCGCGCCTG CTCCGGCCCC GAGTGCGGGT CTGCCGCCGT CACCCGCCGC CGCCAAAGTT
GCGGCCGATG CCCATGTCGA TACGCAGGCG ATCGATGGCT CCGGCAAACG CGGCCAGGTG
CTGAAAGGCG ATGTGCTCGA TTATGTCGCC AAGGGCGCGG CGCCTGCTGC GGCTCCGGCC
CCGGTTATCG CCCGTGCGCC CGCGCCGCAG GAAGATGGTG CGCGTGAAGA ACGGGTGCGC
ATGACCAAGC TGCGCCAGAC CATCGCGCGC CGCTTGAAAG ATGCGCAGAA TACCGCCGCC
ATGCTCACGA CCTTCAACGA GGTCGACATG ACCGAGGTCA TGGCCCTGCG CGCGAAATAC
AAGGATATTT TTGAAAAGAA GCACGGCACC AAGCTCGGCT TCATGGGCTT TTTCGTGAAG
GCTTGCGTCG CGGCCTTGAA GGATATTCCG GCCGTCAATG CCGAGATCGA TGGTACCGAT
CTCATCTACA AGAACTATTA CCACCTTGGC ATTGCGGTTG GCACCGATAA GGGTCTCGTC
GTGCCTGTCG TGCGTGACGC TGATCAATTG AGCATCGCCG GCATCGAAAA GACGATCGCG
GGTTATGGCA AAAGGGCGCG CGACGGTCAG TTGAAGATCG AGGAAATGCA AGGCGGCACG
TTCACGATCA CCAATGGCGG CATTTACGGC TCCCTGATGT CGACGCCGAT CCTGAATGCG
CCGCAGTCGG GCATTCTCGG CATGCACAAG ATCCAGGACC GGCCGATGGT CGTCGGCGGC
AAGATCGAGA TCCGGCCGAT GATGTATCTG GCTCTGTCCT ATGATCACCG TATCGTCGAC
GGCAAGGAAG CCGTGACCTT CCTCGTCCGC GTCAAGGAAG AGCTGGAAGA TCCGGCCCGC
CTGGTTCTCG ATCTCTGA
|
|---|
| Protein sequence | MTTEIRVPTL GESVTEATIG KWFKKAGDAV KADEPLVELE TDKVTLEVNA PAAGVLGEIV
AKDGDTVGVG ALLGQIVESG AGAAPAAAKP AALAPAPTPA AAPAPAPSAG LPPSPAAAKV
AADAHVDTQA IDGSGKRGQV LKGDVLDYVA KGAAPAAAPA PVIARAPAPQ EDGAREERVR
MTKLRQTIAR RLKDAQNTAA MLTTFNEVDM TEVMALRAKY KDIFEKKHGT KLGFMGFFVK
ACVAALKDIP AVNAEIDGTD LIYKNYYHLG IAVGTDKGLV VPVVRDADQL SIAGIEKTIA
GYGKRARDGQ LKIEEMQGGT FTITNGGIYG SLMSTPILNA PQSGILGMHK IQDRPMVVGG
KIEIRPMMYL ALSYDHRIVD GKEAVTFLVR VKEELEDPAR LVLDL
|
|---|
| |