| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3595 |
|---|
| Symbol | |
|---|
| ID | 6201252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 4072840 |
|---|
| End bp | 4073541 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641707549 |
|---|
| Product | permease-like protein |
|---|
| Protein accession | YP_001834639 |
|---|
| Protein GI | 182680493 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.487773 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.963136 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGGA CGATCATTAT TCTCTTGTTT GTCGCGGGGC TGTTGGGCGG TCTTGTCAAT
GCGATTGCTG GCGGAGCGAC TCTCTTGACA TTCCCGGCCA TGCTGGCGGC TGGATTGCCT
CCCGTCGTTG CAAATGCCTC CAATGCGGTC GCTATTGCTC CGGGACATTT GCTCGCGGCA
CTGGCGGACT GGACAAAATT GCGGCCCTTC GATCAGTCTG TCATTCTCTC CTTGATGATC
GCCATCATTG GAGGGGCCCT GGGCGCCTTG CTGGTGCTCG CGCTTCCCGA ACGGCTTTTC
GTCTTGCCGA TCCCGGGCCT TATCGGTCTC GCGACATGTC TGTTCGCCTT TGCCCCGCAG
ATCCAATCAT GGACGCATAA ACGAAACGGC AGAACAAGAC CTTCTCCCAT CGGAGATTTC
GCGGCGCTTG CCAGCGCCTC CCTTTATGGC AGTTTCTTCG GGGCGGGGCT CGGCATTGTC
CTGACGGCTT TGCTCTCGAT GGCCGGAAAC ACTCTGTATG CTGACGGGAG CCTTGCTGGG
TGGCTATGCG GGTGGTCGTC TCATTCGTAT TCTTCCGGCG CGTATGATCC GTGTGTTCGT
GATCACCGCG GGTCTTTTAA TGACGATTAT CTATGCGCAA ACACTATTGG TAATCAGCAG
CAGTGCATAA TGGGAAGGAA CACCTTCACG AGCACGATGT AG
|
|---|
| Protein sequence | MDWTIIILLF VAGLLGGLVN AIAGGATLLT FPAMLAAGLP PVVANASNAV AIAPGHLLAA
LADWTKLRPF DQSVILSLMI AIIGGALGAL LVLALPERLF VLPIPGLIGL ATCLFAFAPQ
IQSWTHKRNG RTRPSPIGDF AALASASLYG SFFGAGLGIV LTALLSMAGN TLYADGSLAG
WLCGWSSHSY SSGAYDPCVR DHRGSFNDDY LCANTIGNQQ QCIMGRNTFT STM
|
|---|
| |