| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3588 |
|---|
| Symbol | flhA |
|---|
| ID | 6201133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 4066406 |
|---|
| End bp | 4068496 |
|---|
| Gene Length | 2091 bp |
|---|
| Protein Length | 696 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641707543 |
|---|
| Product | flagellar biosynthesis protein FlhA |
|---|
| Protein accession | YP_001834633 |
|---|
| Protein GI | 182680487 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
|---|
| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.591822 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGATG CTTCATTGAG TATGCCCGGC GAAGCGAATG GCAAAAATGT CCGTGATATA
GGATTTGCCG CGGGCATTAT CGCTATCCTG TCTGTTTTCT TCCTTCCTAT CCCTGCTTTT
TTCATTGATC TGGGCCTGGC TTTTTCTATC GCGCTCTCCG TCCTCATCCT GATGGTCGCG
TTATGGATCC AACGGCCATT GGATTTCTCC GCCTTCCCCA CTATTCTTCT TGTCGCGACT
CTCTTGCGGC TCGCTCTCAA TATTGCGACG ACGCGGCTGA TTTTGTCGCA TGGTTCGGAA
GGGACGACTG CCGCAGGTTA TATTATCGGC GGTTTCTCGA AACTGGTCAT GAGCGGTGAC
TTCGTCATCG GGCTGATTGT CTTTGCGATT CTGATGACGG TCAATTTCGT GGTGATCACG
AAAGGCGCGA CTCGCATCGC GGAAGTCGGC GCGCGCTTTA CGCTGGATGC CATTCCGGGC
AAGCAAATGG CGATTGATGC CGATCTTTCA GCTGGATTGA TCGACGAAAA ACAAGCCCAA
GTGCGGCGCC GGGAACTTGA GGAAGAGAGT TCCTTTTTTG GTTCGATGGA TGGTGCTTCC
AAATTTGTGC GCGGCGATGC CATCGCAGGC CTTATCATTT TGGCGGTAAA TATTTTTGGT
GGCATTGTCA TTGGTGTCAC GCGGCACGAT ATGCCGCTCA GTCAGGCTTC CGATGTCTTC
ACGAAACTGT CCGTGGGTGA CGGGCTTGTC TCCCAGATTC CTTCGCTGAT CGTTTCATTG
GCGGCGGCGC TACTCGTCTC GAAGGGGGGA ACCAGGGGGA CGGCGGAGCA AACGGTTCTC
GATCAGCTCA TCAAATATCC CCGCGCGCTT TATGTGGCGG CTTTGTTGAT GGTTCTCCTG
GCCGTCATTC CTGGCCTGCC AATGGTGCCG TTTTTGCTGC TTGCGGCTGT TTTTGTGGTG
ACCGCCAACA CGATTCCGAA AAGGATCGCC GAGGCCGAAA AAAGAGAGAA GGCCAAACGT
GAGGCTGCGG AGCGGCAGGC TGAGAAAGAA GCCAAGAATT CTGTCAAGGA ATCGCTGAGA
TCTGCGGAAA TCGAACTCTG TCTTGGCAAG CAATTGGCGA CAAAATTGCT CGAAACGCAT
AATGAGCTTT CTCATCGTGT CGCCAAAATG CGACGCAAAT TCGCCAAGCA ATATGGGTTC
ATCGTTCCTG ATATCAAATT GTCTGATAGT CTCTCGATTC CTGCGAAATC CTATCAGATC
AAGATTCATG GGACGATCGT CGCGACCTAT GAATTGAAAC TTGGGGATAT GCTTGTCGTT
ATCGGTGATG GTCGTAGGCC CGATCTACCC TTCGAAGAGA CTCGTGAGCC CGCATTCGGC
ATGAAAGCGC TTTGGATCTC GCAAGCTTTT ACCAATGAGG TGAGAAAGGA AAATTTTGTT
CCAGTCGACA TCATGTCTGT GTTGTTGACG CATCTCAGCG AAGTGATCCG CAGCAATCTG
TCTCAGCTTT TGTCTTACAA AGACATGCGC GCGCTTTTGG ATCAGCTGGG GCCTGATTAC
AAGCGCTTGA TTGATGATCT CTGCCCGTCG CAAATCTCTT ATTCAGGTCT GCAGGCGGTC
TTGAAGCTTT TGCTCGCGGA ACGTATCTCC ATCCGTAATC TTCCGCTTAT TCTAGAGGCC
GTTGCCGAAA TCGCACCGCA TGTGCGACGT TCCGAGCAGG TGGTTGAACA TGTTCGTATG
CGGATCGCGC AACAGATTTG CGGCGATTTG AGTGAAAATG GCGTGTTAAA AATCATGCGT
CTTGGCCAAC GCTGGGACCT CGCTTTCCAT CAAAGCTTGA AGCGGGATGG CAAGGGTGAA
GTCGTCGAAT TTGATCTCGA TCCCGCCATG GTCGAGCAAT TCAGCAAGGA GGCGACACGT
GCCATCCGGG ATCATCTCGA TAAAGGGGAG CAATTTGCGC TCGTGGCCAC ACCTGAATCA
CGCCCCTATG TGAGGCTCGT CATCGAACGG CTCTTTGCTA ATCTGCCCGT GCTTTCCCAT
CTCGAGCTTG CTCGTGGCCT CGACATCAAG GTTCTCGGGA CGATTTCGTG A
|
|---|
| Protein sequence | MVDASLSMPG EANGKNVRDI GFAAGIIAIL SVFFLPIPAF FIDLGLAFSI ALSVLILMVA
LWIQRPLDFS AFPTILLVAT LLRLALNIAT TRLILSHGSE GTTAAGYIIG GFSKLVMSGD
FVIGLIVFAI LMTVNFVVIT KGATRIAEVG ARFTLDAIPG KQMAIDADLS AGLIDEKQAQ
VRRRELEEES SFFGSMDGAS KFVRGDAIAG LIILAVNIFG GIVIGVTRHD MPLSQASDVF
TKLSVGDGLV SQIPSLIVSL AAALLVSKGG TRGTAEQTVL DQLIKYPRAL YVAALLMVLL
AVIPGLPMVP FLLLAAVFVV TANTIPKRIA EAEKREKAKR EAAERQAEKE AKNSVKESLR
SAEIELCLGK QLATKLLETH NELSHRVAKM RRKFAKQYGF IVPDIKLSDS LSIPAKSYQI
KIHGTIVATY ELKLGDMLVV IGDGRRPDLP FEETREPAFG MKALWISQAF TNEVRKENFV
PVDIMSVLLT HLSEVIRSNL SQLLSYKDMR ALLDQLGPDY KRLIDDLCPS QISYSGLQAV
LKLLLAERIS IRNLPLILEA VAEIAPHVRR SEQVVEHVRM RIAQQICGDL SENGVLKIMR
LGQRWDLAFH QSLKRDGKGE VVEFDLDPAM VEQFSKEATR AIRDHLDKGE QFALVATPES
RPYVRLVIER LFANLPVLSH LELARGLDIK VLGTIS
|
|---|
| |