Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_3519 |
Symbol | |
ID | 6199052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 3997923 |
End bp | 3998627 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641707474 |
Product | pseudouridine synthase |
Protein accession | YP_001834565 |
Protein GI | 182680419 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.477125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.108825 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACTT TCGATCTTCA GGCCCGGCTC CTCTACCGGG ACGGCATGAT GCTCGTCCTC GACAAGCCGG CCGGCATTCC CGTCCACAAA GGCCCGAAAG GTGGCGACAA TCTCGAAGCC TTCTTTGATG ATCTGCGGTT CGGCCTGCCC CGCCGCCCGG CCCTGGCGCA TCGGCTCGAT CGCGACACAT CGGGATGCCT GGTGCTCGGC CGTCATCATA AAGCGCTTGA AAAATTGGGT CTTTTGTTCA AGCAGGGCAA GATCGCCAAA ACCTATTGGA GCGTGGTCCT AGGCGGACCG ACTGAAGACG AAGGCCTGAT TGATTTGCCG CTCGGGCGGC GTGATGCCGA GCGCGGCTGG TGGATGAAGG TCGATCCCGA GGGCGCGCCG GCGCAGACCC GTTGGACAGT GCTGGCGCGC TCCGCGGATC ATTGTCTTCT GGCTTTAAAA CCCTTGACTG GGCGCACGCA TCAATTGCGG GTGCATTGCG CCGCGCAAGG ATTTCCGATC CTCGGCGATC CGGTCTATGG GCCGGCGGAT CACAAAGGCG GCGAAACCCT GCATCTCCAT GCCCGCGCCA TCGAGATCCC GCTTTACAAG AACAAGGAAG CGATCAAGGT CGAGGCCCCT GTGCCAGCGC ATATGCGGCC GGCGCTCATG GCGCTCGGCT GGCGGGAGGA GACTCAAGAC CGTCCGGAGG TCTGA
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Protein sequence | MSTFDLQARL LYRDGMMLVL DKPAGIPVHK GPKGGDNLEA FFDDLRFGLP RRPALAHRLD RDTSGCLVLG RHHKALEKLG LLFKQGKIAK TYWSVVLGGP TEDEGLIDLP LGRRDAERGW WMKVDPEGAP AQTRWTVLAR SADHCLLALK PLTGRTHQLR VHCAAQGFPI LGDPVYGPAD HKGGETLHLH ARAIEIPLYK NKEAIKVEAP VPAHMRPALM ALGWREETQD RPEV
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