Gene Bind_3505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_3505 
Symbol 
ID6199414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp3981603 
End bp3982694 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content61% 
IMG OID641707460 
Productputative deoxyribonuclease 
Protein accessionYP_001834551 
Protein GI182680405 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.618009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.621388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTGGT CGCCGCAACA GGACGCGGCT CTGCGGGCGG TTGCAGCCTG GCTGAAGCGC 
GGCGAGCCTC AGGTGTTTCG CCTGTTCGGT TATGCCGGCA CCGGCAAGAC CACGCTCGCG
CGCCGGATCG CCGAGGATCT CGACGAGACG GTCGCCTTTG CCGCCTATAC CGGCAAGGCG
GCTCTGGTTC TGCGCTCCAA GGGCTGCGAG GACGCCCGCA CCATCCATAG TCTGATCTAT
CGCAGCCGGG GCGTTGAGGC GGAAACACCG TCCTTCGTGC TCAATGAGGA AAGCCCCGTC
GCCAAGGTCG GGCTCGTCGT CATCGATGAA TGTTCCATGG TCGATGAAGA ATTGGGCCGC
GACCTGCTCT CTTTCGGCAA ACCGGTGCTG GTTCTGGGCG ATCCGGCGCA ATTGCCGCCG
GTCAAGGGAG GTGGCTTCTT CACCGAGGGT GAACCAGACA TCATGCTGAC CGATGTGCAT
CGGCAGGCGG CGGATAATCC GATCATCCAT ATGTCGATGC TCATCCGCGA GGGCGGGACC
CTGCCTTATG GGCGTTATGG CGAGAGCATG GTGATCGGCC GCGACGCCAT TGATGCGGGG
CAAGTGACCA GGGCCGATCA GGTGCTGGTC GGCCTCAACC GCACGCGGCG CGCCTATAAC
AAGCGTCTGC GGGAATTATT CGGCCATGCG GAGCCCATGC CGGAGGTGGG CGACAAGCTC
GTCTGTCTGC GCAACGACAA GACCAAGGGT TTGTTGAACG GCGGGATCTG GATGGTCAAG
GCGAATGCCG GGCTGCGCAA GAAGAAGCTG CAAATCGATG CCGTGCCCGA GGAGGATCAA
ACGCGCCGGC CGCTCCGGCT CTCAGTGCTT CCGGATTTCT TTGAAGGGAC GGAAGAAAAT
TTGACCTATC AGCAGCGCCG CACCTCGGAT GAATTTGATT ACGGCTACGC CCTGACGGTC
CACAAAGCGC AAGGCTCGCA ATGGAACCGG CTCGTTTTGT TTGATGAAAG CTTCGCCTTT
CGCGAGCATC GCAGCCGCTG GCTCTATACC GGGATCACGC GTGCGGCAGA ACATCTGGTG
ATGGTGGTCT AG
 
Protein sequence
MDWSPQQDAA LRAVAAWLKR GEPQVFRLFG YAGTGKTTLA RRIAEDLDET VAFAAYTGKA 
ALVLRSKGCE DARTIHSLIY RSRGVEAETP SFVLNEESPV AKVGLVVIDE CSMVDEELGR
DLLSFGKPVL VLGDPAQLPP VKGGGFFTEG EPDIMLTDVH RQAADNPIIH MSMLIREGGT
LPYGRYGESM VIGRDAIDAG QVTRADQVLV GLNRTRRAYN KRLRELFGHA EPMPEVGDKL
VCLRNDKTKG LLNGGIWMVK ANAGLRKKKL QIDAVPEEDQ TRRPLRLSVL PDFFEGTEEN
LTYQQRRTSD EFDYGYALTV HKAQGSQWNR LVLFDESFAF REHRSRWLYT GITRAAEHLV
MVV