Gene Bind_3501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_3501 
Symbol 
ID6199194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp3978532 
End bp3979431 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content62% 
IMG OID641707456 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_001834547 
Protein GI182680401 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.42914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAAAGT CGCCTGATGC TCCGATCCTG GTCTTTGGCG CCGGCGGCCA ATTGGGCCAG 
GAGGTTATGG CCCAAGGGTC TGCGCGCGGC CTGCCCGTTC AGGGTGTGAA GCGCGCCGAG
GCCGATATTG GTGACGCCGC CGCTGTCACA GCGGCGATCG AGAGCCGCAA GCCGCGCCTG
ATCCTCAATG CCGCTGCCTT TACCGCCGTG GATAAGGCTG AAAGCGAACC CGAGGCCGCG
CATCTTGCCA ATGTCGTGGG TATTGAAATC CTCGCCAAGG CGGCCGCGCG TTTCGACGTG
CCGCTCGTGC ATATTTCCAC CGATTATGTT TTTGACGGCT CGAAACAAGG AGCCTATGTC
GAGAGTGATC CCATAAAGCC GCTTGGTGTC TATGGTGCGA CCAAGGCCGA GGGCGAAGCC
AGGCTGCGCG CGGCGGCGCC CAAACATATC ATTTTGCGGA CAGCCTGGGT GTTTGGCCCC
TATGGAGCCA ATTTTCTCAA AACCATGCTG CGGCTGGCGG GGGAACGCGA TCTCTTGCGT
GTCGTCGCCG ATCAGCGCGG CTGCCCAACC GCGACGGCCG ATATTGCCGC CGCTGTCTTT
GCCATTGATC AAGCGCTCGA TGCTCCTGCC GCCGATCTAT GGGGCACCTA TCATTTCGCC
GGCGCGGATG CGACCACATG GCATGCATTC GCCGATGCGA TCGTGGAGGC GCAGACCCGC
TGGAGTGGCC GTCGTCCCAA GGTTGAGGCG ATCACGACAC AGGATTATCC GACGCCCGCG
AAACGGCCAC AGAATTCGGA ACTCAACAGC GGCTTGTTTG CCGCGACTTT CGGCTATCGC
GCCGCGCCTT TGGCGGAAAG GATCGCGGAA ACCTTGGCAA GTCTTCGCAC GGCCGCATAA
 
Protein sequence
MAKSPDAPIL VFGAGGQLGQ EVMAQGSARG LPVQGVKRAE ADIGDAAAVT AAIESRKPRL 
ILNAAAFTAV DKAESEPEAA HLANVVGIEI LAKAAARFDV PLVHISTDYV FDGSKQGAYV
ESDPIKPLGV YGATKAEGEA RLRAAAPKHI ILRTAWVFGP YGANFLKTML RLAGERDLLR
VVADQRGCPT ATADIAAAVF AIDQALDAPA ADLWGTYHFA GADATTWHAF ADAIVEAQTR
WSGRRPKVEA ITTQDYPTPA KRPQNSELNS GLFAATFGYR AAPLAERIAE TLASLRTAA