Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_3490 |
Symbol | |
ID | 6201597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 3965102 |
End bp | 3966613 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641707444 |
Product | major facilitator transporter |
Protein accession | YP_001834536 |
Protein GI | 182680390 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.691229 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGAGT CTCCCTCCGG CTTTCCCCAA TCGCCCTCCG GACCCTCCAC GGTTCCGGCC GCCGCGTCAG CGCCGCTGAC GCGCTCGGAA ATTCTCTGGA TTTTCTCAGG CCTCATGCTC GCCATGTTGC TGAGCTCGAT GGACCAGACC ATTGTCGCGA CGGCCATGCC GACGATCGGC CGTGATCTTG GCGATGTCGA ACATCTGCCT TGGGTCGTGA CCGCTTATCT TCTGGCGGCG ACCGCCGCCA CGCCGCTTGG CGGTAAGCTG GCCGATATTT ACGGCCGCCG CATTATCCTG CTCACCTCGC TCGGCCTGTT TCTCTTGGGG TCCATCGCCT GTGGCCTTGC GCGGTCCATG ACCCTTTTGA TCCTGGCGCG CGGCCTCCAG GGTCTGGGGG GCGGCGGTCT GATCTCGCTG GCGCAAACCA TCATTGCCGA CCTCGTCACC CCGCGCGAGC GCGCGACCTA TCAGATCCAT ATCGCCTCGG TTTTCATGGC TTCGAGCCTT GGCGGCCCGG TGCTTGGCGG TTTTCTGGCG CAGCATGGCC ATTGGTCGCT GATTTTCTGG ATCAATATCC CCTTCAGCCT CGCCGCTTTG TTCATGTGCG GCAAATATTT GCGCAAGCTG CCGCGGCGCG AGCATCCTCA CAAGCTCGAT CTCGTCGGCG CCGTCTTGCT CCTCACCGCG ACGACGAGTC TTTTGCTCGC CTTGAGTACC GGCGCGGCGC AGGGGTGGAC GTCGCCCTTT GTGGCGATGC TTATCGTGCT GAGCCTTGTG AGTTGGACAA GCCTCATCTT TTGGCTGCAC AGGACCGCCG AGCCCCTGAT CCCGATTGCC CTGCTGCATG ATAATGTCGT TGCCCGCGCC ACGCTCGGGG CCTCGCTTAG CATCGGCGTC TTCATCTCCC TGTCGATCTA TATGCCGCTC TATTTCGAGG CCTATCGCCA TTTGAGCGCG AGCCAGTCGG GCCTTGCTCT TCTGCCGCTC ATGGCCGGCA CGGTCATTGG CTCGACCCTA TCTGGCCGGC TCATGATCAG GGTGATCCAT TATAAGCGCG TGCCGCTCGC GGGGCTTGCT ATTGCCTTTA GCGCCACCTG TCTGCTCGCT GCCGAGTCGA TGACCCTGCC CTTGCCCTGG CTCTCCATCA TTCTGGGTCT GGTCAGCATG GGGCTCGGCC TCGTTTTGAC CATTTCGACG GTTTCGGTCC AGAATGCGAC GCCCCCGCAT CAGCTCGGCA CCGCGACGGC AGTGATGAAT CTCTGTCGTC AGCTCGTCGC TGCAATCATC GTCGCGATTT TCGGCGCCAT GATTCTTGGC TCGGGGCGAG GCGTGGAGAG TGTTTCGGCC GAGGGTTTGA GCCCTGACGA ACAAAGGCTG CTTGGTTCCT CTTACACCTA CGTCTTCATT GCCGCCGCTG GTCTTATGGC GATCGCTTTT TGCGCCTATT TGCGCATGGA GGAGCGGCCG CTGACCGGAT CGCGGTCATC CGACCACCCT GCTTCTTCCT AA
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Protein sequence | MSESPSGFPQ SPSGPSTVPA AASAPLTRSE ILWIFSGLML AMLLSSMDQT IVATAMPTIG RDLGDVEHLP WVVTAYLLAA TAATPLGGKL ADIYGRRIIL LTSLGLFLLG SIACGLARSM TLLILARGLQ GLGGGGLISL AQTIIADLVT PRERATYQIH IASVFMASSL GGPVLGGFLA QHGHWSLIFW INIPFSLAAL FMCGKYLRKL PRREHPHKLD LVGAVLLLTA TTSLLLALST GAAQGWTSPF VAMLIVLSLV SWTSLIFWLH RTAEPLIPIA LLHDNVVARA TLGASLSIGV FISLSIYMPL YFEAYRHLSA SQSGLALLPL MAGTVIGSTL SGRLMIRVIH YKRVPLAGLA IAFSATCLLA AESMTLPLPW LSIILGLVSM GLGLVLTIST VSVQNATPPH QLGTATAVMN LCRQLVAAII VAIFGAMILG SGRGVESVSA EGLSPDEQRL LGSSYTYVFI AAAGLMAIAF CAYLRMEERP LTGSRSSDHP ASS
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