Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_3451 |
Symbol | |
ID | 6201691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 3917752 |
End bp | 3919491 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641707398 |
Product | D-lactate dehydrogenase |
Protein accession | YP_001834497 |
Protein GI | 182680351 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.770916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.693661 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACCA CCCTCAACGA GCATCGGGCG GCGAGCGGCG TGCCGGATCA AGGCAATGAG ATCTTGATCG CGACATTGAA AGGCATTGTC GGAGACAGCC ATGTTCTGAC GAGCCCTGAA GCCACTTTGC GATTTCGCAC TGGCTTTCGC TTCGGTCGTG GCTCCGCGCT GGCGGTGGTG CAGCCGGGCA GCCTCGTCGA GCAATGGAAA GTGCTGCAGG CCTGTGCGGC AGCGGACAAG ATCATCATCA TGCAGGCCGC CAATACGGGG TTGACCGGCG GCTCGACCCC GGATGGCGAT GATTATGATC GTGAGATCGT CATCATCAGC ACTTTGCGGA TGGCCAAGGT CTATCTGATC GAGGAGGGGC GGCAGGTAGT CTGCCTGCCC GGCGCGACGC TCTATCAGCT TGAACAGGTT TTACGGCCCC TCGGCCGCGA GCCGCATTCG GTCATTGGCT CTTCCTGTAT TGGCGCTTCG GTGTTTGGCG GTGTCTGCAA CAATTCCGGC GGCGCCCTGA TCCAGCGTGG ACCAGCCTAT ACACAAATGA CGCTCTATGC CCGCATCGAC GAAACGGGCA AGATCGAATT GATCAATCAT CTTGGCATTC GTCTCGGCAA TGATCCCGAG ACGATCCTGA AAAGGCTCGA TGACGGCGAT CTCAAAGATA CGGATGTCGA TCATGATCCG AGCCGTTTCG CCTCGGATCA TGATTACATT CATCATGTCC GTGATATCGA GGCGGATACG CCGGCGCGAT TCAACGCCGA CCCCAAACGA TTGTTCGAAG CCTCGGGGAG CGCCGGCAAG GTCATGCTGT TCGCGGTCCG GCTGGATACA TTCGAGCGCG AGGAGAAAAC AGCCGTTTTC TATATCGGGA CCAATGATCC GGCGGAATTG ACCGAGATTC GCCGGCATAT TCTGGCGCAA TTCAAAACCC TGCCGGTGTC GGGCGAATAT ATGCATCGCG ACGCCTTCGA CATTGCCGAA ACCTATGGCA AGGATACGTT TCTCGCGATC CGCGCGCTCG GCACGGATCG ATTACCCAAA CTTTTTGCCT GGAAAGCCAA GTTCGATGTG TTCGTGCAGA GATACAGGTT TCTGCCCCAA GATCTCAGCG ACAAGATCAT GCAGGCGGTG AGCCGTCTCT TTCCGAGCCA TCTGCCCCCG CGGATGAAAG ACTATCGCGA CCGGTTCGAG CATCATCTGA TGCTAAAAAT GGCCGGCCCC GGCATCGAGG AGGCGCGCAC CTATCTGCGA TCCATTTTCC CCTCGGCGAA GGGACATTTC TTCGAATGTA CGCCGGAGGA GGGCGTAAAG GCTTTTCTGC ATCGTTTCGC GACCGCCGGT GCGGCGATCC GTTATCGCGC GATCCATCGC CAGGAAGTGG AGGATATTGT CGCTCTCGAC ATAGCGTTAC GCCGCAACGA TCGCGACTGG ATAGAAACCC TGCCGCCCGC CATTGACGCG CCAATCCTCC ATAAACTCTA TTACGGCCAC TTCTTCTGTT ACGTCTTCCA CCAGGATTAT ATTGTGAAGA AGGGCCATGA CACGCTGGCG CTCGAACACG AGATGTGGAC GCTTCTCGAT GAGCGCGGCG CGCAATATCC AGCAGAGCAT AATGTCGGGC ATCTTTATCA TGCCAAACCA GCCCTGGTCG GGCATTATAA AAACCTCGAC CCCTGCAATA CGTTCAATCC GGGCATTGGG CATACATCGA AACATGCCCA TTGGCGGTGA
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Protein sequence | MTTTLNEHRA ASGVPDQGNE ILIATLKGIV GDSHVLTSPE ATLRFRTGFR FGRGSALAVV QPGSLVEQWK VLQACAAADK IIIMQAANTG LTGGSTPDGD DYDREIVIIS TLRMAKVYLI EEGRQVVCLP GATLYQLEQV LRPLGREPHS VIGSSCIGAS VFGGVCNNSG GALIQRGPAY TQMTLYARID ETGKIELINH LGIRLGNDPE TILKRLDDGD LKDTDVDHDP SRFASDHDYI HHVRDIEADT PARFNADPKR LFEASGSAGK VMLFAVRLDT FEREEKTAVF YIGTNDPAEL TEIRRHILAQ FKTLPVSGEY MHRDAFDIAE TYGKDTFLAI RALGTDRLPK LFAWKAKFDV FVQRYRFLPQ DLSDKIMQAV SRLFPSHLPP RMKDYRDRFE HHLMLKMAGP GIEEARTYLR SIFPSAKGHF FECTPEEGVK AFLHRFATAG AAIRYRAIHR QEVEDIVALD IALRRNDRDW IETLPPAIDA PILHKLYYGH FFCYVFHQDY IVKKGHDTLA LEHEMWTLLD ERGAQYPAEH NVGHLYHAKP ALVGHYKNLD PCNTFNPGIG HTSKHAHWR
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