| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3447 |
|---|
| Symbol | |
|---|
| ID | 6201668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 3912564 |
|---|
| End bp | 3913397 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641707394 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001834493 |
|---|
| Protein GI | 182680347 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.679069 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.861336 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAA CTCTCACCAA GACAGAACCA GACGATTTGC CGCCAAATTT CAAAGGCGGC
CTATCCAAGG CGCGGCCTCT TGGCACTCTG CCCCCGCGCG AGACCGCGAA GCGGCAGAAG
TCGGACAAGG TGAAAATCAT TCAGACGCAG AATGGCAAAC CGGTTTCGAT TCTCCTCGTC
GAGGACGAAG CCGACATGGC CTCGGAAATC GCCGCGGAGC TGACCAAGCT TGGTTATCAT
GTGCAGATCG AAGAGACGGG GCCCGCTGGG CTTGCCGCCG CGCGCTCGCA AGCCATGTCC
CTGTTGATCA TCGACCGCAT GCTCCCCGAA ACCGATGGTC TCACGCTCAT TGAGACTTTG
CGGCAGGAAG GGATCCTGAC GCCCGTCCTC GTGGTCAGCG CGCTCGGATC GGTCGATGAG
AAAATCCGTG GCCTCAAGGC CGGGGGCGAC GATTATCTGA CCAAGCCCTT TGCCATGGGC
GAACTCGCCG CACGCGTCGA GGCTCTTCTG CGCCGGCCTG CCGCCGAAGC CCGCAGCGCC
ATTCTGCGCG TCGGCTCGCT GGAAATGGAT CTGATCGAGC GCACCGTGCG GCGCAATGAA
CGCCTGCTCG ACCTGCTGCC ACGCGAATTC AAGCTGTTGG AATATCTTAT GCGCCGGCCG
GGCCAGACGG TGACACGGGC CATGCTGCTC GAGGATGTTT GGAATTATAA CTTTTTGCCG
CAGACCAATC TGGTCGATGT GCATATCGGC AAGCTGCGCA AGAAGATCGA TCAACCGGGC
GAGGTCCAAA TGATCGAGAG TGTGCGCGGC GCCGGGTTCC GGCTCAACAA TTAA
|
|---|
| Protein sequence | MNKTLTKTEP DDLPPNFKGG LSKARPLGTL PPRETAKRQK SDKVKIIQTQ NGKPVSILLV
EDEADMASEI AAELTKLGYH VQIEETGPAG LAAARSQAMS LLIIDRMLPE TDGLTLIETL
RQEGILTPVL VVSALGSVDE KIRGLKAGGD DYLTKPFAMG ELAARVEALL RRPAAEARSA
ILRVGSLEMD LIERTVRRNE RLLDLLPREF KLLEYLMRRP GQTVTRAMLL EDVWNYNFLP
QTNLVDVHIG KLRKKIDQPG EVQMIESVRG AGFRLNN
|
|---|
| |