Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_3438 |
Symbol | mdoD |
ID | 6201465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 3904009 |
End bp | 3905646 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641707385 |
Product | glucan biosynthesis protein D |
Protein accession | YP_001834484 |
Protein GI | 182680338 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGAA AATCATTTGA GTCCGAGAGC GTTGGCTTGT GCCGGCACCG CCGCGACGTC TTGAAAGCCC TGACGGCTTT CGGTCTCCTG TCCCAAAGTT CGGCTTTTCT TCGCGCTGAT CCCGCGAAAA ACCCCTCACA ACTGGGATTA CGGCTTGGAC CAGCCGAGCC CTTTTCTTTC ACCCTCTTGA AGGATCTGGC GCGTCGACGC GCCGCCGCCC CCTATTCGCC ACCCCCGGAA ATCGATCCCG ATATCATCGC TCAACTCGGT TATGACGCCT GGGGCGAGAT TAGTTTCGAC ATGGATCACG CCTTATTCGC CGAAGGGCCC GGTCGCTTTC CGGTCAGTTT CTTCCCGCTC GGCAATTTCT TCCACAAATC GGTCGCGATG CATGTCGTCG CAAATGGCAC GGCGCGAGAG ATCCTTTATG ATCCCTCTTA CTTCCAAATG CCGGCGGACT CACCGGCGCG GCGCCTGTCG CCAAACGCCG GCTTTGCCGG TCTGCGCATC CAGGAGGCCC GCGATGGTGC CCTTGATTGG CGCCATAATG ATTGGGTAGC CTTTCTCGGC GCGTCCTATT TCCGGGCGAT CGGCGCCCTG CATCAATATG GCCTTTCGGC GCGTGCTGCC GCTCTCGACG TCGCAGTCGC CGGCCATGCC GAGGAATTTC CCGATTTCAC GGGTTTCTTC ATCGAACAGG ATGAGACCCG CGACGGCCTG ACGATCTATG CGCTGCTGGA AAGCCCTTCG CTAACGGGCG CCTGCCGCTT TGTCCTGACG CGCGATAAAG GCGTCACGAT GCATGTGGAC CAGACGCTCT CTATCCGTAA GCCCGTCACC CGTTTCGGTC TCGCGCCCCT GACTTCGATG TTCTGGTTCT CCGAAACCGT CAAGCCGACC GCCGTCGATT GGCGACCGGA AGTGCATGAT TCCGATGGGC TTGCGATCTT CACGGGCAAT GGCGAGCACC TCTGGCGGCC GCTCAACAAT CCGCCGCGCA CCATGGTCTC CTCGTTTATC GATCAGCATC CGCGCGGCTT CGGCCTGTTG CAGCGGGATC GCATTTTCGA TCACTACTTG GACGGGGTGC GCTATGATCT CCGTCCGAGC CTCTGGGTCG AGCCCCTGGG CGAGTGGGGC AAAGGCGCGG TCCAGCTCGT CGAAATTCCG ACCAACGACG AAATCCACGA CAATATCGTC GTCATGTGGG TGCCGGAGCA GCCCATGACG GCCGGAACCG AATTAAACCT CGCCTATAAA CTCTATTGGC AGGCCGATGA GCCCTTTCCG AGCCCGCTTG CACGCTGCAT CGCGACACGG CTCGGCAATG GCGGGCAGCC TGGCCAACCA CGGCCGAAAA GCATCCGCAA ATTCATGGTC GAATTTTTGG GCGGCCCCCT CAAGGACCTC CTTCCCGGTG AAAAGCCAGA GGCCGTTCTC TGGGCCTCGC GCGGCGGCTT TTCCTATATT TTTACCGAAG CCGTGCCCGA TGACGTGCCG GGCCATTGGC GGGCGCAATT CGACTTCACC GACAGCGCCC CGGCCGACAC AAACGATCCC GTCGAAATGC GCCTCTATCT CAAAACCGGC AACAAAGTGC TGAGCGAGAC CTGGGCCTTT CAATATCACC CGTTCTGA
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Protein sequence | MSGKSFESES VGLCRHRRDV LKALTAFGLL SQSSAFLRAD PAKNPSQLGL RLGPAEPFSF TLLKDLARRR AAAPYSPPPE IDPDIIAQLG YDAWGEISFD MDHALFAEGP GRFPVSFFPL GNFFHKSVAM HVVANGTARE ILYDPSYFQM PADSPARRLS PNAGFAGLRI QEARDGALDW RHNDWVAFLG ASYFRAIGAL HQYGLSARAA ALDVAVAGHA EEFPDFTGFF IEQDETRDGL TIYALLESPS LTGACRFVLT RDKGVTMHVD QTLSIRKPVT RFGLAPLTSM FWFSETVKPT AVDWRPEVHD SDGLAIFTGN GEHLWRPLNN PPRTMVSSFI DQHPRGFGLL QRDRIFDHYL DGVRYDLRPS LWVEPLGEWG KGAVQLVEIP TNDEIHDNIV VMWVPEQPMT AGTELNLAYK LYWQADEPFP SPLARCIATR LGNGGQPGQP RPKSIRKFMV EFLGGPLKDL LPGEKPEAVL WASRGGFSYI FTEAVPDDVP GHWRAQFDFT DSAPADTNDP VEMRLYLKTG NKVLSETWAF QYHPF
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