| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3405 |
|---|
| Symbol | |
|---|
| ID | 6201593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 3864623 |
|---|
| End bp | 3865930 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641707352 |
|---|
| Product | MiaB-like tRNA modifying enzyme |
|---|
| Protein accession | YP_001834451 |
|---|
| Protein GI | 182680305 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.227449 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACCC ATGCCAGCGC GGCTTGTGTC GAAACCTTGA GTTTCGGCTG CCGCCTCAAT
TTCGTCGAAG CGGAGACGAT GCGCCGCGCC GCCAAAGCGG CCGGATTTGA GAATCTCGTC
ATTGTCAATA GCTGCGCGGT GACCGCCGAG GCGACCCGCC AAACACGTCA GGCGATCCGA
CGCGTCAAGC GCGAGCAGCC CGAGGCGAAG ATCGTGGTGA CGGGCTGTGC CGCCGAGACC
GAGCCGGAGC GTTTTCGCGC CATGCCCGAG GTCGGCCTTG TGCTCGGCAA TGCCCGAAAA
ACGGAAGCGG CGACATGGCT GGCGTTGAAA CACCAAGCCT CTGATCTGCC CCTGGACGCA
CCCCACGCGG AGGCCTTGCA CCGACCACGC CTCTCACCTC AGGCGGGCAC CGAGGATCAC
ACCCGTGCTT TTCTCGCGGT GCAGAATGGC TGCGATCATC GATGCAGTTT CTGCATCATT
CCGCAGGGGC GTGGCTCGTC CCGCTCCGTC CCCCTGGACG ACGCCATAGC CATGGCGCGT
GACCTCGCAG CGCGGGGTTT TCTCGAAATC GTTCTCACCG GCGTCGATCT CACATCCTAT
GGCTCCGATC TGCCTGACGT TCCGCGTCTC GGCGATCTGG TTCGACGAAT CCTGCGCGAG
GTCCCCAGCC TCCCACGCCT GCGCCTTTCC TCAATTGATT GCATCGAGGC CGATCCCGTC
CTGGTGCGCT GCTTCGCCGA GGAAGAGCGA CTGATGCCTT CGCTGCATCT CTCTTTACAG
GCCGGTTCGG ATCTCATCCT GAAACGCATG CAGCGCCGGC ATGGACGCAC CGATGCCATC
CGATTTTGTG CCGAATTGCG CCGTTTGCGC CCGGACATCG CCTTTAGCGC CGATCTCATC
GCCGGATTTC CGACCGAGAC GGAGGCGCAA TTCACCGATA CGCTCGATCT GGTCGACGCC
TGTGGCCTGA CTTCCCTGCA CGTCTTCCCT TTCTCCGCCC GGCCCGGCAC GCCAGCGGCG
CGCATGCCTG CCGTCGCCCC GACCATCGTT AAAGAGCGGG CGCGGCGGTT GCGGGAAAAG
GGGACCCTCG CACTGGCCTC CCATCTCGGC ACGCATGTCG GACACAGGCG CCGTCTCCTC
AGCGAGCGCG GCGGCCTGGC CCGGACGGAA GATTTCGCAC CGGTGCGCTT GCACAATATT
GCCCCTGGAC GACTGGTCGA GGCCTTGATC ACCGGCAGCG ATGGCGAAGT CCTCCAGGGA
GCCATCGTTC CTGACAGGAG TGGGTCGATG AACGCGATCC CTCTTTAA
|
|---|
| Protein sequence | MKTHASAACV ETLSFGCRLN FVEAETMRRA AKAAGFENLV IVNSCAVTAE ATRQTRQAIR
RVKREQPEAK IVVTGCAAET EPERFRAMPE VGLVLGNARK TEAATWLALK HQASDLPLDA
PHAEALHRPR LSPQAGTEDH TRAFLAVQNG CDHRCSFCII PQGRGSSRSV PLDDAIAMAR
DLAARGFLEI VLTGVDLTSY GSDLPDVPRL GDLVRRILRE VPSLPRLRLS SIDCIEADPV
LVRCFAEEER LMPSLHLSLQ AGSDLILKRM QRRHGRTDAI RFCAELRRLR PDIAFSADLI
AGFPTETEAQ FTDTLDLVDA CGLTSLHVFP FSARPGTPAA RMPAVAPTIV KERARRLREK
GTLALASHLG THVGHRRRLL SERGGLARTE DFAPVRLHNI APGRLVEALI TGSDGEVLQG
AIVPDRSGSM NAIPL
|
|---|
| |