| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3371 |
|---|
| Symbol | |
|---|
| ID | 6201634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 3826120 |
|---|
| End bp | 3828057 |
|---|
| Gene Length | 1938 bp |
|---|
| Protein Length | 645 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641707317 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001834417 |
|---|
| Protein GI | 182680271 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.289065 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATT ATCTTCCTGC TCCTTCGACA ACTGATTACA TTACATATAC GGGCGTTGGC
ATGGTGCCCG CCTCCACTGT CACAGTTTAC AATGGCAGTA CCGAGGCAGG CACGGCGACC
GTTGCGGCGG ATGGCACATG GTCCTTTACA TTCTCGGTAA CACCGGCCAG CGGGTCGGAA
ATTTATTACA CAGGTGAGTC CACAAGCTCG TCCATCACTG TCCCGTCCTT TGCGACGCTT
GTCCCGCTTT CACTCTCCCC GCTCACGGTG CAAGCGGGTG GCACATTCAG CGGCACAATC
ACAGGTCAAA CAGCTGGCTC GACGATTGCC GCCCTCTCGA CGGATGGGAC GGCTCTGACG
GTCAGCGGCG ACAATGTGAC CGGGACATTC TCTGCCAATG GCGTCATGAC AATCAGCCTG
ACCGAGATGC TCGCGGGGGC CACGAATACA CCCCATCTCT CGACCACAGA GATGACTGTC
TCGAATAATA CGTCTCAGGA CCCGGCATTC AGCCTCGCGC GGACCGTCCT TGTCGCGAAT
GGCGGCACGA GCCTCAGTGC CAATGGGTTC TCATTTAAGG CGGTCACGAT TTCCAATGTT
TCCGGTGTTT ATGCCGATGC CTATTACATG CGCGGCTATA TGACCCCGCT CATGTCTCTC
ATGGGCTGGA ACTATGAGAA CTCGCGCGTC TGGGCCATCG GTGGCAATAC GCTTGCTCAG
GTCCTCTCCA ACTACAGCGC AACGGGTGTC ACGCCGGCCA ATACGCGGTG GGGCACGCTC
GGATCGGGTG GCTGGTCGCC GGATATCTTC TTCGCTGAAG GCGGCTCGAA CGACCTTGGC
AACACATTGA CACAGATGCA ATCCGATGCC ACGGCGGTCG ATAATTATCT GCTCGGCCTC
AGTCCCGTCC CTCGCATCCT GAACGAGTCC ATCTGGCCGC GGACCAGCTT TCCGACCGGC
ACCGATCTGA CCTTCGTCCG GTCCGAGCGG CTCCAATTCA ATCAGTGGCG TGAACAGAAA
AGCGCCTCGT TTCCAAAGTT AAAAGCGTAT AACCTTGACG CACTCATGCA GGACCCGGCA
AATCCTGGTC AGGCGAACCC ACCCTATACC TATGACGGCG TGCATCCGAA TTCCAAGGGC
GCGATCCGCG TCGCGAACGA TATGTTCTCG AAACTGTCGT CGCTCAACAT GTTGCCGGCC
CCAGTGCTTC TCCCGCTGAC CCTTGATGCG GCGGCCGATC CGACCAATCT GCTGCAGCAC
GAAGGTGCAA CCAATTCGGC GCGACAGCTT CTCGCCGGTA CATCGGGTGG TTTGACCAAT
TTCGCGACAG GGAGCGTCAT ATGCTCCGGC TTCAACGCGT CCGCCGACGC AAGTTGGGGA
ACGACGGACA CCCAGGCGCT TCCGGCTTTC TCGATGGAGG CGGATGACAA CGCGACGAAA
CTGAAGCGGA TGGTCATTAC CTATCCGACC AGGACTTCGC CGGGAACACT CGGAAATGGC
AGTGCCGACG CGGGCAAAAT CTGGGTCGTC GTCGGGACAG GCGGGACGCT GATCTCCTCC
GCACGCGCCT CAAACTATGA TGGGGCAGGG GCGAGCATCG TGGCTGGTAA TCGCTACCGG
GCTGGTGTCC GGCTCCAGAT TATCAACGGC GTCAACCTGT TCCCGGCTGC GTTCTACTTC
AGGTGGAAAG TCGATGGGGT GACGGTGATT CAGACCTCGT GGGCCTGTTC CAGCCTTTAT
GACGCCAATG ACGCCTTCCC TGACGGCACC TATGACATAT TGTCGCCGAT CTTCACGGTG
CCGGCCTTCC AATCCTCGAT CGAGTTGACC AGTCTGCAAG TTTATCTCGC CAGCGTCCCC
GGAGCCCCGG TCGGTGGCAC GGTCAAGCTC AGCAAATGGT ATGTGCGGCC CTATCAGTTC
CTTGCCTCTT GGCCGTAA
|
|---|
| Protein sequence | MTDYLPAPST TDYITYTGVG MVPASTVTVY NGSTEAGTAT VAADGTWSFT FSVTPASGSE
IYYTGESTSS SITVPSFATL VPLSLSPLTV QAGGTFSGTI TGQTAGSTIA ALSTDGTALT
VSGDNVTGTF SANGVMTISL TEMLAGATNT PHLSTTEMTV SNNTSQDPAF SLARTVLVAN
GGTSLSANGF SFKAVTISNV SGVYADAYYM RGYMTPLMSL MGWNYENSRV WAIGGNTLAQ
VLSNYSATGV TPANTRWGTL GSGGWSPDIF FAEGGSNDLG NTLTQMQSDA TAVDNYLLGL
SPVPRILNES IWPRTSFPTG TDLTFVRSER LQFNQWREQK SASFPKLKAY NLDALMQDPA
NPGQANPPYT YDGVHPNSKG AIRVANDMFS KLSSLNMLPA PVLLPLTLDA AADPTNLLQH
EGATNSARQL LAGTSGGLTN FATGSVICSG FNASADASWG TTDTQALPAF SMEADDNATK
LKRMVITYPT RTSPGTLGNG SADAGKIWVV VGTGGTLISS ARASNYDGAG ASIVAGNRYR
AGVRLQIING VNLFPAAFYF RWKVDGVTVI QTSWACSSLY DANDAFPDGT YDILSPIFTV
PAFQSSIELT SLQVYLASVP GAPVGGTVKL SKWYVRPYQF LASWP
|
|---|
| |