| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3322 |
|---|
| Symbol | |
|---|
| ID | 6199735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 3778206 |
|---|
| End bp | 3779105 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641707270 |
|---|
| Product | coenzyme PQQ biosynthesis protein B |
|---|
| Protein accession | YP_001834370 |
|---|
| Protein GI | 182680224 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
|---|
| TIGRFAM ID | [TIGR02108] coenzyme PQQ biosynthesis protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.332476 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTTC TCGTCCTGGG GTCAGCGGCT GGGGGTGGCT TTCCGCAATG GAATTGCCGC
TGCCCGGTCT GCCGCCTGGC TTGGGCGGGA GATAAACGCG TGACGCCCCG CACCCAATCG
AGCCTCGCGG TCAGCGCCGA TGGTGTGCGC TGGCTATTGC TGAACGCTTC TCCAGATCTG
CGCCAGCAAA TCCTGGCAAA TACTGCCGTC CAGCCTCAGG AAGGTAATCG TCATTCGCCG
ATTGCTGGCG TGTTCCTGAC CAATGGCGAT ATCGATCATT TGGCCGGCCT CCTCACTTTG
CGCGAGCAGC AGGCTTTTAC TATTTTCGGC ACGGGCGCGA CTTTGGCGGA AATTGCCGCC
GGCAGCGTCT TCGGTGTCTT GAACAAAGAC CTCGTCTCTA CACAGAAAAT CGCTCTCGAT
GTGCCCTGCG ATACGGGCCT TGGCCTGACT GTCACGGCTT TCGCCGTTCC GGGCAAGGTG
CCGCTTTATC TCGAAGGCGA AAAAGTGCAA ATCGGCGAAC TTTCCGAAAG CACCTTGGGG
CTTGAGATCA CCGATGGTGC CAAGCGCTTT TTCTATATTC CCGGCTGCGC TGCGGTCACG
GATCAAGTGA TTGCGCGCAT CAAGGGCGCT GATCTGCTTT TTTTCGATGG CACGACGTTT
ACCGACCGGG AAATGGTCGA TCTCGGCCTG TCGCAGAAAA CCGCCTGGCG CATGGGTCAT
GTCGCGATGA GCGGCGAGGA AGGCTCGCTG CGGCGTTTGG CCGATTGCGG AATTGGCCGC
AAGATCTACA TCCATATCAA TAATACGAAT CCAGTCCTGA TCGACGATTC GCCGGAACGG
GCATCGGTCG AAAAAGCGGG CTGGCAAGTC GCGTATGACG GCATGGAGGT AGTAGCGTGA
|
|---|
| Protein sequence | MRVLVLGSAA GGGFPQWNCR CPVCRLAWAG DKRVTPRTQS SLAVSADGVR WLLLNASPDL
RQQILANTAV QPQEGNRHSP IAGVFLTNGD IDHLAGLLTL REQQAFTIFG TGATLAEIAA
GSVFGVLNKD LVSTQKIALD VPCDTGLGLT VTAFAVPGKV PLYLEGEKVQ IGELSESTLG
LEITDGAKRF FYIPGCAAVT DQVIARIKGA DLLFFDGTTF TDREMVDLGL SQKTAWRMGH
VAMSGEEGSL RRLADCGIGR KIYIHINNTN PVLIDDSPER ASVEKAGWQV AYDGMEVVA
|
|---|
| |