| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3301 |
|---|
| Symbol | |
|---|
| ID | 6200806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 3756679 |
|---|
| End bp | 3758703 |
|---|
| Gene Length | 2025 bp |
|---|
| Protein Length | 674 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641707249 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001834349 |
|---|
| Protein GI | 182680203 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.808009 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.64014 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCGA TGCTGAAATC TCCAGCGATG ATGGGCAAAT GGCGTCCACC GCTCGCTTTG
GTCGTGACCT GTCTTCTATG TTTTGCTGTG GCCTTGCCAC TGGGCGGCGT TTTTTTCTTT
CGCATCTATG AAAATCAATT GGTGAGGCAG GCGGAAGCCG AACTGATCGC GCAAAGCGCA
GCGCTTGCGC CAGTCATCGC ACGAGACATC GAAGCCGCCT TGCCAGCCGA CACGCCCCTA
GGAGCCGCTG CGCCATTGGC AACTCCGACG CAGGAGGAGC CTTATCGCCC GATCATGCCG
CATCTCGATC TCGCAGATAA AGACCTCCTA CCAAGCCGCC CGGATGCGCG CCCGCCGACA
AGCCCTCCGG ATCCCGCTCT TCTCGCGCTT GGCGTAAAAA TTCTGCCCGA TCTCCTTGCG
ATCCAGCGCA CCACTTTAGC TGGCTTCCGG TTGCTCGATG CTGAGGGAAC CGTCATTGCC
GGCCGTAACG AAATCGGTCT GTCGCTCGCT CATGTGGAGG AAATTGCGGC AGCCTTGAGA
GGCGAATTTC GTTCCGTCAT GCGCATGCGC ATTTCGAAAC ATCCGCCGCC GCCGCTTTAT
TCGATGAGCC GTGGCACTGG CGTGCGCGTG TTTACTGCAA TGCCTATCAT TGTGCGCGAT
CATGTCACCG CCGTACTTTA CGCCTCGCGC ACGCCAGCGA ATGTGTTCAA GAATCTCTAT
GAAGAGCGAA ACAAAGTCAT TCTCGCAAGT GTCTCAGTGA TCCTGCTGAC AGGCCTTGCA
GGTTTTGTGT TTCATCGAAC CATTACGCGC CCCGTGCGTG AACTCATCGC CCGAACACGC
GCGATTTCTG CCGGAGATAC TGCCGCCTTG CGGCCTCTGT CCCATCACGG CACGGCAGAA
TTTGCCATGC TGTCACGAAG CTTTCTCGAT ATGGCGACGA GCCTCGCTCA TCGCTCAGCT
TTCATCGCGA CCTTTGCCGC CCATGTCTCA CATGAGCTGA AGTCACCCCT GACATCAATA
AAAGGCGCAG CCGAACTGTT GCTTGACGAT CTCGAAGCTA ATCCCCAAAC CATGGACGAT
AATGATCGGC GTCGCTTTCT CGATCATATT GTGGTCGATG CGGCGCGTCT GACAGATCTC
GTGAGCCGCC TGCGTGATCT CGCCCGTGCT GAAAACACGC CAATATCCGG CACAGCCACT
CTTGATCCTG TTTTGCAGGA GCTTCGAAAG CAATGGCCTC ATCTGGAGAT CAATGCGCAG
GGTGATGTTC ATCGACAGGC GCGCATATCG ACAGAAAACC TGCACATCAT CCTTTCGCAT
CTGATCGACA ATGCCACGCA TCACGGCGCG AAAAAAGTTA CCGTCGAAGC CTTTGCAGAC
AAGGAAATCC TGCAGATCAC GATCAAGGAT GACGGTAGCG GAATCTCACC GAATAATGCG
ACAAAAATCT TCGAGCCCTT CTTTACCACA CGCCGCCTGG AAGGCGGCAC AGGCATGGGG
CTTTCAATTG TCCGCGCCAT GATCGAAGCG CATAGCGGTT TTATCGATTG CCTTGATATA
ACAACCGGTG CAGCATTTGT GCTGAGGCTT CCTCTGGCGT CTGGCGCAGA AAGCCTTTAT
GTGACGTACA TCGGCTTGCG GCTTCGCCGG TTCTTGCTCT GCCTCATCGT CATTGCATCC
GGGCTCGCCT TACGCTGTTT CGGCGCTGAC ATTGGATTGC CTGTCGCTAT CGTTAAATAT
GGCGGCTCGA TTTTATGGGG AGCGATGGTT TTCTTGCTGG CGGGAATGAT CTTGGCACGC
CAATCCCGAT CGCAAATCGC ATCCATTGCA GCCGTAATCG CTCTCGTCGT CGAATTATCC
AGGCTTTACC ACACGCCGTG GCTCGACACC TTCCGCATCT CAACGGCGGG CGCCTTGCTA
TTGGGCCGGT TCTTTTCGAT CTTCAATATC GTCGCTTACG GTGCCGGGAT AATTCTCGGT
CTCCTGATGG ATAAGTTATG TGAGAGAGAT GCAGCAAGAC TTTAG
|
|---|
| Protein sequence | MKSMLKSPAM MGKWRPPLAL VVTCLLCFAV ALPLGGVFFF RIYENQLVRQ AEAELIAQSA
ALAPVIARDI EAALPADTPL GAAAPLATPT QEEPYRPIMP HLDLADKDLL PSRPDARPPT
SPPDPALLAL GVKILPDLLA IQRTTLAGFR LLDAEGTVIA GRNEIGLSLA HVEEIAAALR
GEFRSVMRMR ISKHPPPPLY SMSRGTGVRV FTAMPIIVRD HVTAVLYASR TPANVFKNLY
EERNKVILAS VSVILLTGLA GFVFHRTITR PVRELIARTR AISAGDTAAL RPLSHHGTAE
FAMLSRSFLD MATSLAHRSA FIATFAAHVS HELKSPLTSI KGAAELLLDD LEANPQTMDD
NDRRRFLDHI VVDAARLTDL VSRLRDLARA ENTPISGTAT LDPVLQELRK QWPHLEINAQ
GDVHRQARIS TENLHIILSH LIDNATHHGA KKVTVEAFAD KEILQITIKD DGSGISPNNA
TKIFEPFFTT RRLEGGTGMG LSIVRAMIEA HSGFIDCLDI TTGAAFVLRL PLASGAESLY
VTYIGLRLRR FLLCLIVIAS GLALRCFGAD IGLPVAIVKY GGSILWGAMV FLLAGMILAR
QSRSQIASIA AVIALVVELS RLYHTPWLDT FRISTAGALL LGRFFSIFNI VAYGAGIILG
LLMDKLCERD AARL
|
|---|
| |