| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3299 |
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| Symbol | |
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| ID | 6200804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 3753204 |
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| End bp | 3755261 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641707247 |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_001834347 |
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| Protein GI | 182680201 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.269398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.821458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAAA AAGACACTGA CAAGACCGAT GGTGAAGGTG GTGGAGTCGA GACCGTCGAC
AGCCCCCTGC TCGATCTCTC CGATGCCGCT GTCAAGCGGA TGATCAAGGT CGCCAAGAAG
CGCGGCTTTG TGACCTATAG CGAACTCAAT GCAGTCCTGC CCTCGGAAGA AGTCAATTCC
GAGCAGATCG AGGACATTTT GGCGATGCTC AACGAAATGG GCATCAATGT CGTCGAGAGC
GAGGAGCAGG ATACCGAGGA AAGCGAAGAC AGCAACGAGG AAGAAGAGAG CGAGGGTGGC
GACCTCGTCG AGGCCTCGCA AAGCAAAGCT GTCACCACGC GCTCGTCCGA ACCCTCCGAC
CGGACAGATG ATCCGGTGCG CATGTATTTG CGCGAAATGG GCTCGGTCGA ACTTCTTTCG
CGCGAGGGCG AAATCGCCAT TGCCAAAAGG ATCGAGGCCG GCCGCGAGGC CATGATCGCG
GGCCTGTGCG AAAGCCCCCT CACCTTCCAG GCGATCATCA TCTGGCGCGA CGAACTCAAC
GACAGCAAGG TTTTGCTGCG CGATATCATC GATCTCGAGG CGACCTATGC GGGGCCTGAG
GGGCGCAGCA GCCCCAAGCT TGATCTGGAC GCCACGGACG AGGAAGACCC CGACAATCCA
GACGCGCCCG AAGCGCCCTC GACCGCGCCG CTCAATCCAC CGGGGCGCCT GCGGCCGGCG
CGCGAGGACG GCGATATTGA CCCGCCGCCG ATGGAGGAAA TGTTCGACGA GGAAGACGAC
ATGGAAAATT CCGTGTCGCT CTCGGCGATG GAAGCCGAAT TGAAGCCGAA GGTTCTCGAG
ACCTTCGACC GCGTCGCCGA TGCCTATAAG AAACTGCGGC GCCTGCAGGA CCAGAATGTC
GAGAATAAGC TCAAGAACGA GACTCTGACA CCGGCGCAAG AGCGTAAATA TAAAACGCTC
AAGAAAGAGA TTGTCGCTGA CGTCAAGAGC CTGTCGCTCA ACCAGAACCG TATCGAGGCC
CTGGTCGAGC AACTCTATGA CATCAACAAA AGGCTGATCG GCCAGGAGAC GCGGCTGTTG
CGTCTGGCCG AGGGCTATGG CGTCGCGCGC GAGGATTTTC TGAGAAATTA TCAGAATTCC
GAGCTCGATC CGAAATGGTT GCTGCGCGTC TCGAAACTCG GCTCACGTGG CTGGAAGGAT
TTCGTTGCCA AGGCCAAGGA TACGATCAAG GATCTGCTGG GCGAAATTCA TGGGCTTGCG
ACCGAGACCG GTCTTGAGAT CCAGGAATTC CGCAAGATCG TGCATATGGT CCAAAAGGGT
GAACGTGAAG CCCGCCAAGC CAAGAAGGAA ATGGTCGAGG CCAATCTGCG TCTCGTGATT
TCGATCGCCA AGAAATATAC CAATCGCGGC CTGCAATTCC TGGATCTCAT TCAGGAAGGC
AATATCGGCC TGATGAAGGC GGTCGATAAA TTCGAATACA GGCGCGGCTA TAAATTCTCG
ACCTATGCGA CCTGGTGGAT TCGTCAGGCC ATCACCCGTT CCATTGCCGA CCAGGCAAGG
ACCATCCGCA TTCCGGTGCA TATGATCGAG ACGATCAACA AGATCGTACG GACCTCGCGC
CAGATGCTGC ATGAAATTGG CCGCGAGCCG ACACCGGAGG AACTGGCGGA AAAGCTCGCC
ATGCCACTCG AAAAAGTGCG CAAGGTGTTG AAAATCGCCA AGGAGCCGAT CTCGCTCGAA
ACCCCGATCG GCGACGAAGA GGATTCTCAC CTCGGCGACT TCATCGAGGA CAAGAATGCG
ATCCTGCCGA TCGACGCGGC GATCCAGTCC AATCTGCGTG AAACGACAAC GCGGGTTCTG
GCTTCGCTCA CACCGCGCGA GGAACGTGTG CTGCGCATGC GTTTCGGCAT CGGCATGAAT
ACCGATCACA CGCTGGAAGA AGTCGGCCAG CAGTTTTCGG TGACGCGCGA ACGTATTCGC
CAGATCGAGG CCAAGGCGCT GCGCAAGCTG AAACATCCCT CGCGCTCGCG CAAGCTGCGC
AGCTTCCTGG ATAATTGA
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| Protein sequence | MAKKDTDKTD GEGGGVETVD SPLLDLSDAA VKRMIKVAKK RGFVTYSELN AVLPSEEVNS
EQIEDILAML NEMGINVVES EEQDTEESED SNEEEESEGG DLVEASQSKA VTTRSSEPSD
RTDDPVRMYL REMGSVELLS REGEIAIAKR IEAGREAMIA GLCESPLTFQ AIIIWRDELN
DSKVLLRDII DLEATYAGPE GRSSPKLDLD ATDEEDPDNP DAPEAPSTAP LNPPGRLRPA
REDGDIDPPP MEEMFDEEDD MENSVSLSAM EAELKPKVLE TFDRVADAYK KLRRLQDQNV
ENKLKNETLT PAQERKYKTL KKEIVADVKS LSLNQNRIEA LVEQLYDINK RLIGQETRLL
RLAEGYGVAR EDFLRNYQNS ELDPKWLLRV SKLGSRGWKD FVAKAKDTIK DLLGEIHGLA
TETGLEIQEF RKIVHMVQKG EREARQAKKE MVEANLRLVI SIAKKYTNRG LQFLDLIQEG
NIGLMKAVDK FEYRRGYKFS TYATWWIRQA ITRSIADQAR TIRIPVHMIE TINKIVRTSR
QMLHEIGREP TPEELAEKLA MPLEKVRKVL KIAKEPISLE TPIGDEEDSH LGDFIEDKNA
ILPIDAAIQS NLRETTTRVL ASLTPREERV LRMRFGIGMN TDHTLEEVGQ QFSVTRERIR
QIEAKALRKL KHPSRSRKLR SFLDN
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