Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_3280 |
Symbol | |
ID | 6199390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 3731933 |
End bp | 3732811 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641707229 |
Product | transglutaminase domain-containing protein |
Protein accession | YP_001834329 |
Protein GI | 182680183 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.867984 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCTACA CAATCCGCCA TGTGACGACA TACACTTATG GATCGAGTGT CACTTTCGCC CATTGCGAAT TGCGGCTCCT GCCGCAGGAC GGCGCGGGCC AGATGGTCTA TTTGACCGAT CTCCTGATTG ATCCCGCGCC GGCGCGTATC GTCGAAAGAC GCTGTTTCTT CGGCAATCGC TTGACCTCGA TGACCATAGA CACGGCCCAT CGCGCCCTGC GTGTCGAGGC CCGCAGCACG GTCGAGGTTT TGCGCGATCT TCCTCCCGCC GAAAATCTGA CCAGGGATTG GGAAGAGATC CGCGAAGATG CTTTCGATTC GGATACACTT GCCCCCGAAT CCCCCGCGCA TTTCATGCAT CCGAGCCGTT TCGTGCCGCA ATTCAAACCA GCCACGGCCT ATGCCCGGGA AAGTTTTGGG CCTGGCCGCC CAATCCTTGC GGGCGCCGTT GAACTCATGC AACGCATACG CGCCGATTTC CGCTATGACC CAAAGGCAAC GATTGTTTCG ACACCCTTGT CGGAAGCCTT CGAGAAACGC CGCGGCGTCT GTCAGGATTT CGCCCATATC ATGATCGCGG GCCTGCGCGG CATCGGTCTG CCGGCCGCCT ATATTTCCGG CTATATCCGC ACCATTCCAC CGCCAGGCAA GCCGCGCCTT GAAGGCGCGG ACGCCATGCA TGCCTGGGTG GCTGTGTGGT GCGGTGAGGA ATGGGGGTGG ATCGGCCTTG ATCCGACCAA TGCTTTGATG ATCGGCGACG ATCACGTCGT CCTCGCCAAA GGGCGTGATT ATGCCGATAT TTCTCCTGTC GCAGGCATCA TTCTGGGCTC GCGTGAGCAG GATGTCGATG TCTCTGTGGA TGTCGTGCCG CAGGTTTGA
|
Protein sequence | MIYTIRHVTT YTYGSSVTFA HCELRLLPQD GAGQMVYLTD LLIDPAPARI VERRCFFGNR LTSMTIDTAH RALRVEARST VEVLRDLPPA ENLTRDWEEI REDAFDSDTL APESPAHFMH PSRFVPQFKP ATAYARESFG PGRPILAGAV ELMQRIRADF RYDPKATIVS TPLSEAFEKR RGVCQDFAHI MIAGLRGIGL PAAYISGYIR TIPPPGKPRL EGADAMHAWV AVWCGEEWGW IGLDPTNALM IGDDHVVLAK GRDYADISPV AGIILGSREQ DVDVSVDVVP QV
|
| |