| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3231 |
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| Symbol | |
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| ID | 6198830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | - |
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| Start bp | 3674493 |
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| End bp | 3675944 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641707180 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001834280 |
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| Protein GI | 182680134 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGCTT TGCATTCCTT GAAAGTGAAG ACCTGGGACA AGAGGGAGGC CTGTCATCAA
TCGGCTTTCC ATCGCTCTGT CTTTCTGGGC GGCGTGCTGC TTATTCTGAG TTCGGGCATC
TCGGGCGTGA AGAGCGAGAC GATGTCGAGC GCTTTGGCCA ATGCCTATGC CACCAATCCG
GACGTGAATC AGCAGCGTGC CTCCTTGCGC GCGACCGACG AATCGTTGCC GCAGGCCTTG
GCGCTCGGGC GGCCGTCGAT CATGGGAAGC GGACAATATG GTTTCAACCA TCGCTTTTCG
AGTCTACCCG GTCGAAACGG CGCATTTGGT GGTCTCTTCA ATAACGATAT CGGCTATGTG
AATGGTTCAC TGAACCAGAA TATTTTCAAC GGCAATCAAA CCGTGAATAG TGTTCGCCAG
GCGGAATCGA CAATTCTCGG CGGGCGCGAA ACATTGCGCA ATACCGAGCA GAGTGTTCTG
CAAAACGGCG CCACCGCTTA TATGGATGTC CTGCGCGATA CCGCCGTTCT CGAATTACGC
CGCAACAATA TCATTGTTCT CATGGAACAA TTGCGCCAGA CGCGCTACCG TTTCAACGTC
GGGGACGTCA CGCGGACCGA TGTGGCGCAA GCGGAATCGA GCTTGGAAAC CGCGCGTTCG
GATTATTTTA CCGCCCAGGC CAATCTGCAG ACGAGCATCG CCAATTTCCG GCAGGTTATC
GGCCGCCAGC CCAAGCAGCT TGAGGCGGCC GCGACGGTCG AGAAATTGCT GCCGTCCAAT
CTCGACACGG CAATCAGTGT TGCGCTCCTC GAGCATCCCT CGATCCAGGA GGCTCTCCAC
AATGTGGATG CGGCGGCCGC GCAAGTGAAG ATCATTGAAG GCCAGCTTTA TCCAAAGGTC
GATCTCAACG CCACGACGCA AAGAACCTTC AATGTTAATG GCATGACCGG CTATCAGCAG
TACAATGGAA CGATCCAGGG GCAGATGTCC GTGCCGATTT ATGAAAATGG CGGCACGACT
TATTCCCGTA TTCGCCAGGC CAAGGAGCAA GTGACTCAGG CGCGACTTCA GGCGGATCTC
CAGAAAACCA ATGTGCGCGC GGCTCTCGTC TCGGCCTGGG GCCAGCTCAC GACGGCGCGG
GCGACCATTG AATCCTCGAT GGCCGCGGTC AAGGCTTCGG AAATTGCGCT TGAAGGCGTG
CGTGTGGAGG CCCAGGTCGG TCAACGCACA ACGCTCGACG TGTTGAATGC CCAGCAAACT
CTTTTGGGCA ATCGGGTTGC GCTCGTCACG GCGCAGCGCG ATCGCGTCGT TGCCTCCTAT
GTGGTCATGG CGGCCATGGG GAAATTGACG GCCACCAATC TGCACCTCGC TGTGGTGCAT
TACGATCCGA GCGTGCATTT CGATCAGGTC AAGGACAAGT GGGTGGGCGT GCGCACACCT
GACGGGCGGT GA
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| Protein sequence | MRALHSLKVK TWDKREACHQ SAFHRSVFLG GVLLILSSGI SGVKSETMSS ALANAYATNP
DVNQQRASLR ATDESLPQAL ALGRPSIMGS GQYGFNHRFS SLPGRNGAFG GLFNNDIGYV
NGSLNQNIFN GNQTVNSVRQ AESTILGGRE TLRNTEQSVL QNGATAYMDV LRDTAVLELR
RNNIIVLMEQ LRQTRYRFNV GDVTRTDVAQ AESSLETARS DYFTAQANLQ TSIANFRQVI
GRQPKQLEAA ATVEKLLPSN LDTAISVALL EHPSIQEALH NVDAAAAQVK IIEGQLYPKV
DLNATTQRTF NVNGMTGYQQ YNGTIQGQMS VPIYENGGTT YSRIRQAKEQ VTQARLQADL
QKTNVRAALV SAWGQLTTAR ATIESSMAAV KASEIALEGV RVEAQVGQRT TLDVLNAQQT
LLGNRVALVT AQRDRVVASY VVMAAMGKLT ATNLHLAVVH YDPSVHFDQV KDKWVGVRTP
DGR
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