Gene Bind_3200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_3200 
Symbol 
ID6199169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp3640434 
End bp3640916 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content56% 
IMG OID641707148 
Productpreprotein translocase subunit SecB 
Protein accessionYP_001834249 
Protein GI182680103 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.400984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0234316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATG GTAACGGAAC GCAAGAAACG CAAGATCAGG CACCCGCGAT CAATGCGATG 
GTGCAATATA CGAAGGATTT TTCCTTCGAG AACCCGAACG CGCCGCGTTC CTTAGGGCCA
CAGGAAAAGG CCCCGAATAT CGCGATTCAG GTTCATGTCA ACGCGCAACA ATTGGCCGAG
TCCGATTTCG AGGTGAATAT CGTCCTGGAA GGCTCGGCGG GCGAGGGCGC CAATACTCTG
TTCAAGTTCG AGCTCGATTA TGCGGGCATG TTCCGCTTGC TCAATATCTC GCCGAATGAC
ATGCATCCGG TCGTGATGAT CGAATGTCCG CGCCTGTTGT TTCCCTTTGC CCGGCAGATC
ATTGCCGATG CAGTTCGCAG CGGCGGATTC CCGCCCCTCT ATATTGATCC GATCGATTTC
GCCGCGCTCT ACCGCAAGCG GCTTGATGAA GTGGCCGCCA GCGCACCACA GCTGAAATCC
TGA
 
Protein sequence
MADGNGTQET QDQAPAINAM VQYTKDFSFE NPNAPRSLGP QEKAPNIAIQ VHVNAQQLAE 
SDFEVNIVLE GSAGEGANTL FKFELDYAGM FRLLNISPND MHPVVMIECP RLLFPFARQI
IADAVRSGGF PPLYIDPIDF AALYRKRLDE VAASAPQLKS