| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3154 |
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| Symbol | |
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| ID | 6201453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 3598324 |
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| End bp | 3599181 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641707102 |
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| Product | squalene synthase HpnD |
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| Protein accession | YP_001834204 |
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| Protein GI | 182680058 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAG CCGAGGCCGT GATCGTTTCT CCTGAGACCG CCTCCACTGA CGCCGCGACA
CAGTCGCGGC GCAGCTCCTT TTACGCCGCC ATGCGCATTC TGCCCGCGCC ACAGCGCGAG
GCCATGTTCC AGATCTATGC CTTTTGCCGC GCGGTGGACG ATATTGCCGA CGAGGAAGGC
CCCCTGCCCG AGCGTGCGCA AGCCCTGCTG GATTGGCGCG CGGATATCGA TGCCCTTTAT
CGCGGCGCGA TTCCCCGGGC AGCCCTCGTT CCGCTCTCCG AGACCATCCA CGCCTTCGGT
CTCGCCCGCG AGGATTTTGT CGCTGTAATC GACGGCATGG AGATGGACCT TACCGATCGC
GTCGCGATCC CCGATTTTGC GACGCTCGAT CTCTATTGCG ACCGGGTCGC GAGCGCAGTC
GGCAGGCTGT CCGTGCGTGT CTTCGGCGTG CCAGAGACGG AAGGCCAGAA CCTCGCCTAT
CATCTCGGGC GTGCCTTCCA ATTGACCAAT ATTCTGCGCG ACATCGACGA AGACGCCGAG
CGCCAGCGCC TCTATCTGCC GCGTGACCTC TTGATCGCGG CGGGAATCAA GCCCGAGATC
GAGGCTGTCC TGACGAGCCC GGCGCTCGGA CAGGCTTGCC GCTCAATTCT CGACGCGGCG
GCAAAACATT TCGCAGCCGG GGCCGCTATC ATGGACAGAT GTCCGCGCAA GAGTGTGCGG
GCACCCCGCA TCATGGCGCA GGCCTATGGC GCCATCCTCA CACGGCTCGA GGCGCGCGGC
TTCGCACCGC CGCGTGAACG CGTCAAGACC CCCAAATCCC AGATCTTGCT TGCCCTTTTG
CGTTACGGAT TCTTCTAG
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| Protein sequence | MTKAEAVIVS PETASTDAAT QSRRSSFYAA MRILPAPQRE AMFQIYAFCR AVDDIADEEG
PLPERAQALL DWRADIDALY RGAIPRAALV PLSETIHAFG LAREDFVAVI DGMEMDLTDR
VAIPDFATLD LYCDRVASAV GRLSVRVFGV PETEGQNLAY HLGRAFQLTN ILRDIDEDAE
RQRLYLPRDL LIAAGIKPEI EAVLTSPALG QACRSILDAA AKHFAAGAAI MDRCPRKSVR
APRIMAQAYG AILTRLEARG FAPPRERVKT PKSQILLALL RYGFF
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