Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_3138 |
Symbol | |
ID | 6201790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 3581907 |
End bp | 3583013 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641707086 |
Product | CarD family transcriptional regulator |
Protein accession | YP_001834188 |
Protein GI | 182680042 |
COG category | [K] Transcription |
COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTCCG TCAATAAGAC TGGAATAGCG ACCGAGACGC AAACAGCCAA GGGCCAGACC GCGCATCCCC CTGCCGCCGA GGTCGTGTCG CTTTCCGTCG CCTCTGCTAT CGACAAAAAC GCGTCCGGTT CCCCGGATCT TCATGCTTCC GTTGCTTCAT CTGACGACAA TTCCGTTATG TCCATCCCCG ATGACGGAGA GACCACCCTT TCCACAGCCG AGAATGGCGC CATTTTCTCC CAGCCTTTGA AATATCAGCC CCCAAGACAA ATGATCGGAC CCCCGGTGAC CAATAAAACA GACAAGAAAA CAACTGAGGC GGCCGCCGAC GCGCCCGTCG AGACCGCAAT GACCGACACG TCCCTCAATC AACCGGTTCA AAATCCTTCC CTTGCCGGCA AAACCGTGAA AACGACGAAG CCCGCCGTCA AGCCTGCCGC CGCGAAATCC ACGCCACCGG TAAAGACCAC CGCCGCAGCC GGTGCCAATG AGAAATCGCC AGCGGCGAAG CCCACGGGCA AGGCAGCCGG CAATGCCCAG CGCCATGGTT TCAAGCCGCT CGAATTCATC GTCTATCCCG CTCATGGCGT CGGTCAGATC ATCGCCATTG AGGAGCAGGA AGTCGCGGGC TTCAAGCTCG AGCTTTTCGT GATCAGTTTT GTCAAGGACA AGATGATTCT GAAGGTTCCG ACGCCCAAGG CCGTCAGCGT GCGCATGCGC AAGCTCGCCG AGGCGGATGT GATCGACAAG GCGCTCGAAA CCCTCACCGG CCGGGCGCGG ATCAAACGGA CCATGTGGTC GCGCCGGGCA CAGGAATATG AGGCGAAGAT CAACTCCGGC GATCTCATCG CCGTTGCCGA AGTGGTGCGC GATCTCTACC GCTCCGACGC CCAGCCCGAG CAATCCTATT CGGAACGCCA GCTCTACGAG GCTGCGCTCG ACCGTGTCGC ACGCGAACTC GCCGCCGTCC AGAAACTGAC CGAAACGGAA TCCTTGAAGC TCATCGAGGC GCAATTGCTG AAAGGTCCTC GTCGCGGCGG CAGCAAGGTC GAGGAAATCG ATCTCGACGA TGCGGACGAG GATGGCGATA TCGAGGAAGC CGCATAA
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Protein sequence | MASVNKTGIA TETQTAKGQT AHPPAAEVVS LSVASAIDKN ASGSPDLHAS VASSDDNSVM SIPDDGETTL STAENGAIFS QPLKYQPPRQ MIGPPVTNKT DKKTTEAAAD APVETAMTDT SLNQPVQNPS LAGKTVKTTK PAVKPAAAKS TPPVKTTAAA GANEKSPAAK PTGKAAGNAQ RHGFKPLEFI VYPAHGVGQI IAIEEQEVAG FKLELFVISF VKDKMILKVP TPKAVSVRMR KLAEADVIDK ALETLTGRAR IKRTMWSRRA QEYEAKINSG DLIAVAEVVR DLYRSDAQPE QSYSERQLYE AALDRVAREL AAVQKLTETE SLKLIEAQLL KGPRRGGSKV EEIDLDDADE DGDIEEAA
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