Gene Bind_3087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_3087 
Symbol 
ID6198815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp3525177 
End bp3526241 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content57% 
IMG OID641707034 
Productaliphatic sulfonate ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_001834137 
Protein GI182679991 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0286269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGAC GCATAACAGT GTTTTGCGCA CGACGTACCC CTGTCATGCG TCTCGGTCTC 
CTTCTCGCCC TGGTTCTGTA TGTGATTACC AGTCTATCGA CCGTATGGGC CGACGACACA
GACGTTTTGA AAATCGGCGA TCAAAAGGGC GGCACGCATG CCTTGATGCA AGCGGCCGGT
GTGCTTGATG ACATTCCTTA TCGTCTTGAA TGGCGGGTCT TTGCGGCCGC CGCTCCCCTG
ACCGAGGCTT TGGCTGCGGG TGCCATTGAT GCGGGCCTTT TGGGTGATGC ACCATTTCTT
TTCGCCTATG CGAGCGGCGC GCCGATCCGG GTGATTGCAG CGGCGGCACC CGATGGCGAG
AAAAGTGCGG GCGTGGCAAT TCTCGTCCCC AAAAACTCGC AGATCAAATC ACCTCAAGAG
CTCAAGGGCC ATTTGCTTGG CACGATCCGT GGTTCGGCCG GTCATCATTT CGCGCTCCTT
GCGCTGGAAC ATTTCGGCAT CGATCCACGC GATGTCAAAT TCGTCTTTCT CGGCCCGGCT
GAGGCCAAGG CCGCCTTGAG TACCGGCGCG ATCGACGCCT GGTCGATCTG GGATCCCTAC
CTCACCCTAG CCGAAATGCA GGATGGCGCG CGCCCCCTCG TTGATGGGCC GGAGGTGCCG
CGAACCGGCT TCGTCATCGA GGCGGCCAAT ATTGACGCCA TCAATAAGAA ACAGGCGCTC
CTTGAAAATT TTCTAGGCCG CTTCCGTCAA GCCAGGACTT GGCTCGGCAC ACATATCGCT
GATTATGCGC AGGTATGGGC CAAGGAAACC GGCTTGCCTG TCGAGGTCGC GAATGTCGTC
GCACAACGCC ATTACGCATT ATTCAAAAGG GATATTACCC TCGATCACAC GCTGTCTGAT
CAGCTTGCGG CTGTGTTCGA CATTTATCGC CGGCTCGGGG TCGTGACACT GGAGCATGGT
GTGCCTGATA TCGATAAGGC ACTAGCACCA GTCTTCAATT CCGTTCTGTC AGCTTCTTCC
AATCGGACAG GGCAATCCTT TTCGTCGCAA AAGATCACAG AGTAA
 
Protein sequence
MTRRITVFCA RRTPVMRLGL LLALVLYVIT SLSTVWADDT DVLKIGDQKG GTHALMQAAG 
VLDDIPYRLE WRVFAAAAPL TEALAAGAID AGLLGDAPFL FAYASGAPIR VIAAAAPDGE
KSAGVAILVP KNSQIKSPQE LKGHLLGTIR GSAGHHFALL ALEHFGIDPR DVKFVFLGPA
EAKAALSTGA IDAWSIWDPY LTLAEMQDGA RPLVDGPEVP RTGFVIEAAN IDAINKKQAL
LENFLGRFRQ ARTWLGTHIA DYAQVWAKET GLPVEVANVV AQRHYALFKR DITLDHTLSD
QLAAVFDIYR RLGVVTLEHG VPDIDKALAP VFNSVLSASS NRTGQSFSSQ KITE