| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3072 |
|---|
| Symbol | |
|---|
| ID | 6201474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 3507538 |
|---|
| End bp | 3508728 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641707019 |
|---|
| Product | monosaccharide-transporting ATPase |
|---|
| Protein accession | YP_001834122 |
|---|
| Protein GI | 182679976 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4214] ABC-type xylose transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.372878 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.819045 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAACA AGACGATCGC ACTCGGCGAG AAGCCTATCC ACATCAGCTT TCTAAAAGAC
AATCTGCGTG AATATGGCAT GCTGCTATCG CTGTTTGCCA TCATGCTGTT TTTCGAAGTC
ATGACCCAGG GCACGTTGCT ACGCCCACTC AATCTCACCA ATCTTGTCCT GCAAAACAGC
TATATTGTCA TCATGGCGCT CGGGATGCTC CTGGTGATCG TGACTGGCCA TATCGATCTT
TCGGTCGGCT CGGTGGCTGG GTTCATCGGC GCCGTGGCTG CCGTGCTCAT GGTGCACTAC
CATCTGCCTT TCGTTCCTGC CAGCCTCATC TGCCTCGTCC TTGGCGGCTT GATCGGCGCG
GCACAGGGCT ATTGGGTGGC TTATTTCAAA ATTCCCTCCT TCATTGTCAC TTTGGCGGGA
ATGCTCGTCT TCAAAGGCCT GGCGCTGGCG ATTCTACAAG GTCAGTCGGT CGGTCCTTTT
CCACAGACTT TTCAAAAACT GTCTTCTGGT TTCATTCCAG AAGTTTTCAC TGACACCGGC
ACGCTCTATC CGACCTCTCT CCTTATGGGT GCCGCTGTCG CTCTCGTGCT GGTCTATACG
AACTACAAAA ATCGGGCACG CCAGCTTAGC CATGACATCA ATGTCGAACC CAATGGTTTT
TTCATCTTCA AGAATCTGGT GCTCTTCGCG GTCGTTCTTT ATTTTACCTA TCTCATCGCT
TCGCACCGCG GCCTGCCCAA TGTGCTCGTC ATCATGATGG CGCTCATCGC ACTCTATGGC
TTCCTTACAT CACGCACGAC AATAGGTCGC CAGATCTATG CAATTGGTGG CAACGAGAAG
GCTGCCAAGC TCTCAGGTAT CAAGACCGAA CGGCTGACGT TTTTGACCTT TGTGAATATG
GGCGTGCTCT CTGCGCTTGC CGGTCTTGTC TTTGCCGCGC GTCTCAATAC CGCGACCCCG
AAGGCTGGTC TTGGTTTCGA GCTTGATGTC ATAGCAGCTT GTTTCATTGG CGGCGCTTCG
GCTTATGGCG GCGTTGGACG CGTTACGGGA GCGGTGATCG GCGCGCTTAT CATGGGTGTC
ATGAACAATG GCATGTCAAT TCTTGGAATC GGGATCGATT ATCAGCAAGT CATCAAGGGG
CTTGTCCTTC TCGGTGCTGT CTGCTTTGAT GTTTATAATC AGAAGCGATG A
|
|---|
| Protein sequence | MSNKTIALGE KPIHISFLKD NLREYGMLLS LFAIMLFFEV MTQGTLLRPL NLTNLVLQNS
YIVIMALGML LVIVTGHIDL SVGSVAGFIG AVAAVLMVHY HLPFVPASLI CLVLGGLIGA
AQGYWVAYFK IPSFIVTLAG MLVFKGLALA ILQGQSVGPF PQTFQKLSSG FIPEVFTDTG
TLYPTSLLMG AAVALVLVYT NYKNRARQLS HDINVEPNGF FIFKNLVLFA VVLYFTYLIA
SHRGLPNVLV IMMALIALYG FLTSRTTIGR QIYAIGGNEK AAKLSGIKTE RLTFLTFVNM
GVLSALAGLV FAARLNTATP KAGLGFELDV IAACFIGGAS AYGGVGRVTG AVIGALIMGV
MNNGMSILGI GIDYQQVIKG LVLLGAVCFD VYNQKR
|
|---|
| |