Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_3046 |
Symbol | |
ID | 6198201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 3468592 |
End bp | 3470754 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641706994 |
Product | 1A family penicillin-binding protein |
Protein accession | YP_001834097 |
Protein GI | 182679951 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.370823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAAA GCGAGAAAGA CCCCCAGCAG CGGTCGAAAA AGGCCCGGCG TCGCTCGCCC TTATGGCGGA TTTTTTCGGC TTTTTGCGCC CTGGCGATCT GGGCCGGCGT CCTGGGCATC GGTATTATCG GTTATTATAC CCTGAAAATG CCGCCGATCG ATCAGCTTAG TGTGCCCAAA CGTCCACCTA ATATCGCTAT TTTGAGCGAG ACGGGGACCT TGATCGCTAA TCGGGGCGAC ACGGGCGGGG CGACGATTCG CCTGGCCGAT CTGCCACCCT ATTTGCCGCG CGCCTTCGTT GCGATCGAAG ATCGTCGTTT CTATCAACAT TCCGGCATTG ATCCGCTTGG TATTATACGC GCATTGTTCC GCAATGTCGC GGGCGGCGGG GCGATGCAAG GCGGCTCTAC CTTGACACAG CAACTCGCCA AAAATCTGTT CCTGACCCAG GAAAGGACCA TGGCGCGCAA GATCCAGGAG GTGATCCTGG CCGTCTGGCT CGAGCATAAA TACAGCAAGG ACCAATTGCT GGAACTTTAT CTCAACCGCG TCTATTTCGG TTCCGGCGCC TATGGCGTCG AGGCGGCGGC GGAGAAATAT TTCGGCCATC CGGCGAAGCT TGTCACCCTG CCGGAGGCGG CCATGCTGGC CGGGCTGATG AAGGCGCCAA CCAAGCTCGC CCCAACGCAT AATCCGCGCG GCGCGGCGGA GCGGGCCGCG CAAGTCGTCG CCGCCATGCG CGAGGAAGGG TTCATCACCG AATCGATGGC GCAACTCGCC CTCTTGCATC CGGCGCAGGT GCAGCGCAGC CAGGGGGCGG GCTCGTTCAA TTATGCCGCC GATTATGCGA TGGACCTGCT CGACGAGACG ATTGGCACGA TCGATCAGGA TATTCTCGTG ACGACGAGTA TTAGCCTGCC TCTGCAGGCC GCCGCCGAAA AAGCCCTGAC GGAGGAGCTT GACCGCAAAG GCGCGCGCTA TGGGGTGGCG CAGGGCGCCA TGGTCGCGCT CGCGCCCGAT GGCGCGATCA AGGCTTTGGT TGGTGGCCGC AATTATGCCG AAAGCCAGTT CGATCGAGCA GCTTCCGCGC ATCGTCAGCC GGGTTCATCC TTCAAGCCCT TCGTCTATCT CGCCGCGATG GAAGCAGGTC TGACGCCGGA TACTGTCCGC GATGACGCGC CGATCAATAT CAAGGGCTGG CAACCGGAAA ATTATTCCCA TGCCTATCAG GGGCCTGTCA CCCTGACGCG GGCTTTGTCG CAATCTCTCA ATACAGTGGC GGCACGGCTC GGGAATGAGG TCGGTCCCAA GGCGGTGATC CGTTTGGCGC ATCGGCTCGG CATTGAATCG GACCTGCAAG CCAATGCCTC GCTGGCGCTC GGCACATCGG AAGTCACGCC GCTCGAAATC ACCAGTGCCT ATGTGCCCTT TGCCAATGGC GGCATTGGCG TGCAGCCGCA TATCATTCTC AAGGTCAAGA CCGCGAGCGG CCAATTACTC TACCAGCGCA AGGGCAGGAG CAATGGTCGG GTGATCGATG AGGCCTCCCT GTCTATGATG AACCGAATGA TGCAGGAAAC CCTGATCAGC GGCACGGCGC ATGGGACAAG CGTGCCGGGC TGGCAGGCGG CGGGCAAGAC CGGCACGAGC CAGGATTGGC GCGATGCCTG GTTCATCGGC TATACGAGCC ATATGATTGC GGGGGTTTGG CTCGGCAATG ACGATAATTC GCCGACGCGC AAGGCCTCGG GAGGCACATT GCCAGTGGAA ATCTGGTCCC GTTTCATGAA GATCGCACAT CAGAACCAGC CGCCGCAGCC GCTGCCCGGT GGCGTATGGC AAAGCCCGGC GATGCCACAA GTTCTGGCTC CCAATTCGGC TCCTCCGGGT GAGGCGGGGC TTGGCGCGCC GATTGCGGTT GGAGCAGCGC CGCCGGTCTC CGAGGCGCAA GACTCCGCGC CGCGCGCTCA AGCGCCGACT GCCTATGGGG CGCCAGCCGC GTCTTCTTCT TCCTCCTCAT CCTCATGGGC TCCCGAGAAT GACCTCAATG GAATGCTGCC GCCGGCGGCC ATTCCGAACA CTCAGGGGAA TGCAGCCCGA GGAAGAGGGC GCCAGCCGCC GCAAACCGAA CGTGGCCTGT TCGAAAGTCT GTTCGGCGGA TGA
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Protein sequence | MTKSEKDPQQ RSKKARRRSP LWRIFSAFCA LAIWAGVLGI GIIGYYTLKM PPIDQLSVPK RPPNIAILSE TGTLIANRGD TGGATIRLAD LPPYLPRAFV AIEDRRFYQH SGIDPLGIIR ALFRNVAGGG AMQGGSTLTQ QLAKNLFLTQ ERTMARKIQE VILAVWLEHK YSKDQLLELY LNRVYFGSGA YGVEAAAEKY FGHPAKLVTL PEAAMLAGLM KAPTKLAPTH NPRGAAERAA QVVAAMREEG FITESMAQLA LLHPAQVQRS QGAGSFNYAA DYAMDLLDET IGTIDQDILV TTSISLPLQA AAEKALTEEL DRKGARYGVA QGAMVALAPD GAIKALVGGR NYAESQFDRA ASAHRQPGSS FKPFVYLAAM EAGLTPDTVR DDAPINIKGW QPENYSHAYQ GPVTLTRALS QSLNTVAARL GNEVGPKAVI RLAHRLGIES DLQANASLAL GTSEVTPLEI TSAYVPFANG GIGVQPHIIL KVKTASGQLL YQRKGRSNGR VIDEASLSMM NRMMQETLIS GTAHGTSVPG WQAAGKTGTS QDWRDAWFIG YTSHMIAGVW LGNDDNSPTR KASGGTLPVE IWSRFMKIAH QNQPPQPLPG GVWQSPAMPQ VLAPNSAPPG EAGLGAPIAV GAAPPVSEAQ DSAPRAQAPT AYGAPAASSS SSSSSWAPEN DLNGMLPPAA IPNTQGNAAR GRGRQPPQTE RGLFESLFGG
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