Gene Bind_3037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_3037 
SymbolmnmA 
ID6198150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp3458687 
End bp3459982 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content59% 
IMG OID641706985 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_001834088 
Protein GI182679942 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0151115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGG GGTCCTCGGA TGTGACGAGT TCTGGCCTGG ATCACGCTGG ATTGAACAGT 
TTGGGGCTGC CAAAGCCGCC GGCTTTAACC CGCGTTGTCG TCGCAATGTC CGGCGGAGTC
GATTCCTCCG TCGTCGCGGC GCTTCTCAAG CGGGAGGGCT ATGAGGTCAT TGGTGTGACC
TTGCAGCTTT ACGATCATGG CGAGGCCGTC CATCGCAAGG GGGCTTGTTG CGCCGGGCAG
GATATTCAGG ACGCCCGGCA GGTCGCAGAT CAACTCGGCA TTCCGCATTA TGTCCTCGAT
TATGAGGAAC GTTTCCGTCG CAAGGTCATC GATCCTTTCG CGCAGAGCTA TGCGACCGGC
GAAACGCCAA TTCCCTGTGT CTCCTGCAAT AGCGAGATCA AATTCGCCGA TCTTTTCGAG
ACGGCGCAGC ATCTTGGCGC CGATGTCCTG GCGACCGGCC ATTATGTCTC TTCGAAGGCC
GAGGCGGATG GGGGGCGTGC GCTCTATCGT TCGCTGGATT CAAGCCGCGA TCAAAGCTAC
TTCCTCTTCG CCACGACCAA TGCCCAGCTC GAACTCCTGC GCTTTCCACT CGGTGATCTC
GCCAAACCGG ATGTGCGGCA AATGGCACGC CAACTCGGTC TCGTCGTTGC CGACAAGGCG
GATAGCCAGG ACATTTGCTT CGTGCCGAGC GGCAAATATA GCGATGTGAT CGAGCGTCTG
TCGCCCGGCG CTGTCGTTCC GGGTGAGATT CTGCATGTCG ACGGCCGGGT ACTCGGGCGT
CATTCTGGCG TCATTCATTA TACAATCGGC CAGAGGCGTG GTCTTGGGCT CGGCGCCGTC
GGCGCTGGCG CGGGTGAGCC GCTCTATGTC ATTCGTCTCG ATGCGGCCAA AGCGCAAGTG
ATTGTCGGTC CCCGTCAGGC GCTCGCCACG CGGCGCGTGC ATTTGCGCGG CGTCAATTGG
ATTGGACCCG GGTCTCTCCA GGATATGGAC GAACATGGTC TTGAAATTTT CGTCCAGGTC
CGTTCCACAC GGGCTCCGAT TCCGGGGTTC CTCCATGCCC ATGAATCGGA AATCTGGGTC
GATTTCGCCC TCGATGAGGA CGGTGTCTCG CCGGGCCAGG CTTGTGTCTT TTATGAGAAT
GATCAGCCGC GGGCACGCGT CCTTGGCGGT GGCTTCATCA GCGCGACGGA ATCCGCGCTG
CAAATGCGCG AAATGTTTCC CAAGCCGCCG AACGAAGACC TTCTCGATAC GAACGAATCC
TCGGATTTGG TTTCTCCCAA ACGATCGGCT TGTTGA
 
Protein sequence
MELGSSDVTS SGLDHAGLNS LGLPKPPALT RVVVAMSGGV DSSVVAALLK REGYEVIGVT 
LQLYDHGEAV HRKGACCAGQ DIQDARQVAD QLGIPHYVLD YEERFRRKVI DPFAQSYATG
ETPIPCVSCN SEIKFADLFE TAQHLGADVL ATGHYVSSKA EADGGRALYR SLDSSRDQSY
FLFATTNAQL ELLRFPLGDL AKPDVRQMAR QLGLVVADKA DSQDICFVPS GKYSDVIERL
SPGAVVPGEI LHVDGRVLGR HSGVIHYTIG QRRGLGLGAV GAGAGEPLYV IRLDAAKAQV
IVGPRQALAT RRVHLRGVNW IGPGSLQDMD EHGLEIFVQV RSTRAPIPGF LHAHESEIWV
DFALDEDGVS PGQACVFYEN DQPRARVLGG GFISATESAL QMREMFPKPP NEDLLDTNES
SDLVSPKRSA C