Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_3037 |
Symbol | mnmA |
ID | 6198150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 3458687 |
End bp | 3459982 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641706985 |
Product | tRNA-specific 2-thiouridylase MnmA |
Protein accession | YP_001834088 |
Protein GI | 182679942 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0151115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGG GGTCCTCGGA TGTGACGAGT TCTGGCCTGG ATCACGCTGG ATTGAACAGT TTGGGGCTGC CAAAGCCGCC GGCTTTAACC CGCGTTGTCG TCGCAATGTC CGGCGGAGTC GATTCCTCCG TCGTCGCGGC GCTTCTCAAG CGGGAGGGCT ATGAGGTCAT TGGTGTGACC TTGCAGCTTT ACGATCATGG CGAGGCCGTC CATCGCAAGG GGGCTTGTTG CGCCGGGCAG GATATTCAGG ACGCCCGGCA GGTCGCAGAT CAACTCGGCA TTCCGCATTA TGTCCTCGAT TATGAGGAAC GTTTCCGTCG CAAGGTCATC GATCCTTTCG CGCAGAGCTA TGCGACCGGC GAAACGCCAA TTCCCTGTGT CTCCTGCAAT AGCGAGATCA AATTCGCCGA TCTTTTCGAG ACGGCGCAGC ATCTTGGCGC CGATGTCCTG GCGACCGGCC ATTATGTCTC TTCGAAGGCC GAGGCGGATG GGGGGCGTGC GCTCTATCGT TCGCTGGATT CAAGCCGCGA TCAAAGCTAC TTCCTCTTCG CCACGACCAA TGCCCAGCTC GAACTCCTGC GCTTTCCACT CGGTGATCTC GCCAAACCGG ATGTGCGGCA AATGGCACGC CAACTCGGTC TCGTCGTTGC CGACAAGGCG GATAGCCAGG ACATTTGCTT CGTGCCGAGC GGCAAATATA GCGATGTGAT CGAGCGTCTG TCGCCCGGCG CTGTCGTTCC GGGTGAGATT CTGCATGTCG ACGGCCGGGT ACTCGGGCGT CATTCTGGCG TCATTCATTA TACAATCGGC CAGAGGCGTG GTCTTGGGCT CGGCGCCGTC GGCGCTGGCG CGGGTGAGCC GCTCTATGTC ATTCGTCTCG ATGCGGCCAA AGCGCAAGTG ATTGTCGGTC CCCGTCAGGC GCTCGCCACG CGGCGCGTGC ATTTGCGCGG CGTCAATTGG ATTGGACCCG GGTCTCTCCA GGATATGGAC GAACATGGTC TTGAAATTTT CGTCCAGGTC CGTTCCACAC GGGCTCCGAT TCCGGGGTTC CTCCATGCCC ATGAATCGGA AATCTGGGTC GATTTCGCCC TCGATGAGGA CGGTGTCTCG CCGGGCCAGG CTTGTGTCTT TTATGAGAAT GATCAGCCGC GGGCACGCGT CCTTGGCGGT GGCTTCATCA GCGCGACGGA ATCCGCGCTG CAAATGCGCG AAATGTTTCC CAAGCCGCCG AACGAAGACC TTCTCGATAC GAACGAATCC TCGGATTTGG TTTCTCCCAA ACGATCGGCT TGTTGA
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Protein sequence | MELGSSDVTS SGLDHAGLNS LGLPKPPALT RVVVAMSGGV DSSVVAALLK REGYEVIGVT LQLYDHGEAV HRKGACCAGQ DIQDARQVAD QLGIPHYVLD YEERFRRKVI DPFAQSYATG ETPIPCVSCN SEIKFADLFE TAQHLGADVL ATGHYVSSKA EADGGRALYR SLDSSRDQSY FLFATTNAQL ELLRFPLGDL AKPDVRQMAR QLGLVVADKA DSQDICFVPS GKYSDVIERL SPGAVVPGEI LHVDGRVLGR HSGVIHYTIG QRRGLGLGAV GAGAGEPLYV IRLDAAKAQV IVGPRQALAT RRVHLRGVNW IGPGSLQDMD EHGLEIFVQV RSTRAPIPGF LHAHESEIWV DFALDEDGVS PGQACVFYEN DQPRARVLGG GFISATESAL QMREMFPKPP NEDLLDTNES SDLVSPKRSA C
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