Gene Bind_3025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_3025 
Symbol 
ID6198230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp3444091 
End bp3445218 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content60% 
IMG OID641706973 
Productmajor facilitator transporter 
Protein accessionYP_001834076 
Protein GI182679930 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTC TCTCCGCCAT TGCTTCCGTC TCGATTGTCG GCATCGGCCT TTCGCTCGTC 
ATGAGCCTCT TGTCCTTGCT TCTCGGTGAA CAGGGCTATT CGGCACGTGC CATCGGCCTC
AATCCCGCTG CCGCGGGCCT CGCCACCTTG GTCGGCGCCC CCTTAGCCCC CTTGCTGGCC
CGCCGCTTCG GCCTGACCCC CGTTCTGTTT TTTTCCTTGT TTCTTGGCGC ACTTTGCCTT
GCCGCCTTTG CCGTCACCCG TTCCTATTGG GCATGGCTTG TCCTGCGTGC CATTTTTGGC
GGCGCCCTGA CCATGCAATT CGTGCTCAGC GAATATTGGA TCAATGTACT GGCGCCACCT
GAGCGGCGTG GCTTCATCAT GGGCCTCTAC GCGACCAGTC TCGCGCTCGG CTTCGTCACG
GGCCCTGCCA TCCTTTCCGG CGTCGGCACT GAAGGCACTC TGCCTTTCCT GATCCCGATT
GGCCTGTTTT TATTGGCAAG CCTGCCCATT CTCCTCGGTG CGCGCGCGGC TCCCGAGATC
GAGACAGCAT CCGAGAGCGG CGTCGTGTCG TTTCTGCTGC GGGCGCCGGT CGCCAGTTTT
GCAGGTCTTC TGCATGGCAT GATTGAGATG GCCGCCTTCG GCCTTCTCCC CCTTTTTGCC
TTGCAGGCCA ATCTTGGCCC AGCGATGGGA GCGCGACTTG CGGGCTTTTT CGCCTTGGGC
AATGTCCTCT TCCAGATTCC TCTGGGCCTT GCCTCCGACC GTTTCGAGCG GCGCCAGCTG
TTGCTGATCA TCAGCTTGCT CGGCCTTGGC GGTGCACTGC TCTTACCGCT CGTGGGTCCC
ACGCATCAGA ACCTGTTCTG CGGGCTTCTC GTCATCTGGG GCGGCGTTGC GGGAAGTCTT
TATCCCATCG GGCTTGCTTA TCTCGGCGCT CAATATAAAG GCGCGGAACT CGCCAGCGCC
AATGCCGCAT TCGTCATGCT TTATTCGCTG GGCATGCTGG CTGGCCCACC GCTCATGGGC
TATGGCATGG ATCTTCTCAT GCCAAATGGA TTTTTTCTGA CCATTGGGGC GCTTTTCACC
CTGTATCTCG GCTTTATCGC CTGGTGTCTC GTCCGGGGTC ACGACTGA
 
Protein sequence
MALLSAIASV SIVGIGLSLV MSLLSLLLGE QGYSARAIGL NPAAAGLATL VGAPLAPLLA 
RRFGLTPVLF FSLFLGALCL AAFAVTRSYW AWLVLRAIFG GALTMQFVLS EYWINVLAPP
ERRGFIMGLY ATSLALGFVT GPAILSGVGT EGTLPFLIPI GLFLLASLPI LLGARAAPEI
ETASESGVVS FLLRAPVASF AGLLHGMIEM AAFGLLPLFA LQANLGPAMG ARLAGFFALG
NVLFQIPLGL ASDRFERRQL LLIISLLGLG GALLLPLVGP THQNLFCGLL VIWGGVAGSL
YPIGLAYLGA QYKGAELASA NAAFVMLYSL GMLAGPPLMG YGMDLLMPNG FFLTIGALFT
LYLGFIAWCL VRGHD