Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_3015 |
Symbol | |
ID | 6198239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 3433874 |
End bp | 3436162 |
Gene Length | 2289 bp |
Protein Length | 762 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641706963 |
Product | integral membrane sensor hybrid histidine kinase |
Protein accession | YP_001834066 |
Protein GI | 182679920 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCAGC TCGCCGTTTC GCCGTCCCGT TTCCGCCTGC CGCGGCATCT TACCCGCAAA CCGGTTCCTC TTGTCCTGTT GCTTGGTGCG CTCGCGGCTC TGGTGCTGGT GACCGCCGCC GGCTTATCGC TTTCCACCTT GCGTGAACGC GATTTCAATG AAGCCCGCAA TCATCTTGGC ATGCTCAACC AGTTTCTCGT CGAGGAAACA GATCGGACAA TGTCGACTGT GGATCTCGCC TTGACAAATG TCCGGCATGA GATTCTGTCG AGGGACAGTG TGGACGAGGC GAGCTTTCTC GCGAACGGCA GCGACAAGAC GACTCGTGCC GTTCTGGTGG CCGCTCTGAA GGGCACGCCT TTCTTGCAGT CGATCGATTT AATTGCGGCC GATGGTCAGG TGATCAATTC CTCGGGCGGA TCGCTGGGTG TCTTCCCACG CGAGGCGTCA TCGGGCGATC AGAATAATGC CCAGGCGTTT CGCTCTGGCT GCGACGAAGA TTTCGCCGAG CCATTCTTTA TCGACAAGCC GGTTGAGAAT CCCACGACCG GCACTATGAC GATCCCGTTC TGCCGACATA TCGACAGCCT GTCCGGGACC CGTCTTGGCA CGCTCAGGGG CATGATCGAT ATCGCCTATT TCAAGGCTTT CTATCAAATC GTCCAGAAAG ACCCCAATAT TGCGGTCGGT CTCTGGCGGC GCGATGGCAC CATGCTTTTG CAATATCCGC CGGCTTTCAT TTTCTCTCTT TTGTTGAGAG ATAAGGTATC TGCGGATGCG GAGATTCCTT CCGACGACGT GCCGCGTGCC ATGACCATAA AGAATTCCGA GGCTGGACCC GCGCGGCTCG TCATCGTCGG AGCCACGCGG CAATTTCCCC TTGTCGTCAC GATCAGTTTC ACAAGCAGTC AGATCTATCT CGCCTGGTGG CGAACGGCGG TCATGGCGGC AATCGGGTGT CTCTTATGTT TCCTGCTGAT CGGATTCGCG ATCTGGTTGC TGACGCGGCA ATTGACAGCC TATGAGGCTC TTGACCTCGC CATTGCCGAA AAGAGCGAAG CCATCGCCGC CCGCAACGAG GCCGAGGCGC AATTGCGGCA GGCGCAAAAG CTTGAGGCGA TCGGCCAACT CACTGGCGGC ATAGCCCATG ATTTCAATAA TCTTCTCACG GCGGTTCTCG GTAATCTCGA ATTGCTCAGC CGGCATGTCG AGGGCGGAGA CGCCAAGCTC CAGCGTTGGA CCCGCAATGC ACTCGAGGCG GCCAAACGGG GCGCCTCACT GACCGCGCGT CTCCTTGCCT TCTCGCGGCG TCAGCCGCTC GAGCCGCAGC CGGCCGATCT GTTCGCCATG CTCCAATCCA TGAGCGATCT TCTGAGCCGG ACACTCGGCG AGAATATTCA GATCGAGATG CGGATCACTG AACATCTCTG GCGGCCCTTC GTCGATATCA ATCAGCTCGA CAATGCGATT TTGAATATCT GCCTGAATGC GCGCGATGCC ATGGAGGGAC GCGGCAAGCT TGTCATCGCC GCTCGCAATG TCACGCGCGA GGAAACCAAC AATGACATGA CCGATGATGC TTTGTCGGCT GATATCATTA AGGGTGATTA TGTTCTGATC GAGATCAGTG ACAAGGGGCC TGGAATCGAT AAAGCTGTGC TTGAACGGGT GTTCGAGCCC TTTTTCACGA CGAAGCCCAT CGGCCAGGGC ACGGGGCTCG GCCTCAGCCA GGTTTATGGC TTTCTCAAGC AGAGCGGTGG CCATATCGAA ATCGAAAGCG AGAAAGGGCA GGGGACGACA GTTCGCTTGT TTCTGCCGCG CGCCCGCGCC GATGCCGAGC AGGCGAATGC GTCGGAACCT TTGTCACTCG CCGAACCGGT CGGGCATCGC GAAACCTTGC TCATCGTGGA GGATGACGCG GAGGTCCGTG GCTATTCCGT CGAGATTCTC AGAAGCCTTG GTTATACGGT GCTTGTTGCC AAGCAAGCGA ACGAGGCCTT GGCCTATCTG CACCAGTCGC GCGCAATCGA TCTTCTGTTC ACCGATATCG GCTTGCCCGG CATGAATGGC CGTGATCTTG CCGAGGCGGC GCGCATGCTG CGTCCCGGCC TGCCTGTTCT GTTCACCAGC GGTTATGCCC GCTCCGGCGT GCTCGATGAA GAGCACCTTG ACCTCGGAAT GCAACTGCTG CGTAAACCCT TCAGCCGCAC TGAATTGGCC TGGCGTCTGC GCTTTTTGCT GGCGACGCGG CAGGCGGAGG GAAGCCGCAA AGGCGCCGAA GCGAGGTGA
|
Protein sequence | MPQLAVSPSR FRLPRHLTRK PVPLVLLLGA LAALVLVTAA GLSLSTLRER DFNEARNHLG MLNQFLVEET DRTMSTVDLA LTNVRHEILS RDSVDEASFL ANGSDKTTRA VLVAALKGTP FLQSIDLIAA DGQVINSSGG SLGVFPREAS SGDQNNAQAF RSGCDEDFAE PFFIDKPVEN PTTGTMTIPF CRHIDSLSGT RLGTLRGMID IAYFKAFYQI VQKDPNIAVG LWRRDGTMLL QYPPAFIFSL LLRDKVSADA EIPSDDVPRA MTIKNSEAGP ARLVIVGATR QFPLVVTISF TSSQIYLAWW RTAVMAAIGC LLCFLLIGFA IWLLTRQLTA YEALDLAIAE KSEAIAARNE AEAQLRQAQK LEAIGQLTGG IAHDFNNLLT AVLGNLELLS RHVEGGDAKL QRWTRNALEA AKRGASLTAR LLAFSRRQPL EPQPADLFAM LQSMSDLLSR TLGENIQIEM RITEHLWRPF VDINQLDNAI LNICLNARDA MEGRGKLVIA ARNVTREETN NDMTDDALSA DIIKGDYVLI EISDKGPGID KAVLERVFEP FFTTKPIGQG TGLGLSQVYG FLKQSGGHIE IESEKGQGTT VRLFLPRARA DAEQANASEP LSLAEPVGHR ETLLIVEDDA EVRGYSVEIL RSLGYTVLVA KQANEALAYL HQSRAIDLLF TDIGLPGMNG RDLAEAARML RPGLPVLFTS GYARSGVLDE EHLDLGMQLL RKPFSRTELA WRLRFLLATR QAEGSRKGAE AR
|
| |