Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_3014 |
Symbol | |
ID | 6198238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 3430561 |
End bp | 3433845 |
Gene Length | 3285 bp |
Protein Length | 1094 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641706962 |
Product | trehalose synthase |
Protein accession | YP_001834065 |
Protein GI | 182679919 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases [COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
TIGRFAM ID | [TIGR02456] trehalose synthase [TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.602191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGATC GGAATGACGT ATCCTGGTAT CGCGACGCCA TCATCTATCA GCTCCATGTG AAATCCTTTT ACGATCACGA CAATGATGGC ATGGGCGATT TCAAGGGCCT GACCGCCAAG CTCGACTACA TCAAGGATCT CGGGGCGACG GCGATCTGGT TAATGCCCTT CTATCCCTCT CCCCTGCGCG ACGACGGTTA TGACATTTCG GATTATCGCA CGATCAATCC TGCCTATGGC GGGCTGCGCG ACTTCCGACG TTTCGTGCGC GAGGCCCATG AACGCGATCT GCGCGTGATC ACGGAACTCG TCATCAATCA TACATCGGAT CAGCATCCCT GGTTCCAGCG CGCGCGGGCG GCAAAACCCG GTTCCGCCGC GCGCAATTTC TATGTCTTCG CCGAAAACGA TCACCGCTAC AAAGATGCGG GCATTGTCTT TCTCGATACT GAGAAATCCA ACTGGACCTG GGACGACGAG GCAAAAGCTT TCTACTGGCA TCGTTTCTAT GCACATCAGC CGGATCTTAA TTTCGACAAT CCGCGCGTCA TCGAGGCCGT GCTCGACATT ATGGTGTTCT GGCTCGATAT GGGGGTCGAT GGATTACGGC TCGATGCCAT TCCCTATCTC ATCGAACGGG AAGGCACGAA TTGCGAAAAT CTGCCTGAGA CCCATGCCAT CATCAAAAAA ATCCGTGCCG CTCTCGATGC CCGTTACAGC GATCGCATGC TGCTCGCCGA AGCCAATCTC TGGCCAGAGG AGACCGCACA ATATTTTGGC GATGGCGATG AATGCCACAT GGCCTTTCAT TTCCCACTCA TGCCAAGAAT CTACATGGCC CTCGCTCAGG AAGACCGGCA CCCCATCACC GACATCATGC GGCAGACCCC CGATATTCCT GAAAGCGCGC AATGGGCGAT CTTCCTGCGC AATCATGACG AAATGACACT TGCCATGGTC ACCGACAAGG AGCGTGACTA TCTCTGGTCC TTCTATGCGG CAGACCAGCG TGCCCGCATC AACCTCGGCA TCAGGCGGCG GCTCGCCCCT CTGCTCGGCA ATGATCGCCG CAAGATCGAA CTGTTGAACT CGCTGCTTCA TTCCATGCCG GGCACACCCG TGCTCTATTA TGGCGACGAG ATCGGTATGG GCGACAATAT CTATCTCGGC GATCGCGATG GCGTGCGCAC GCCAATGCAA TGGTCGGTCG ATCGCAATGG CGGCTTTAGC CGCGTCGATC CGGCCAAATT GTTCCTGCCG GCCATCCAGG ACCCAATCTA TGGCTATAGC GCCATCAATG TCGAGGCGCA GCTTGCGAGC ACAACCAGCC TGTTGAACTG GACGCGGCGC CTGATTGCCG TGCGTCGTTC CCATGCCGCC TTTGGACGCG GCAGCTTGCG TTTCCTGTAT CCATCGAACC GCCGGGTGCT TGCCTATCTG CGCCTCCATG AGGGCGAGAC ACTTCTCTGC GTCGTCAATG TATCGGGCTC CGCACAGGCC GTGGAACTCG ATCTCGCCGA ATTCAAAAAT GCCGTTCCGG TCGAGTTGAT GGGCGGCGTT CTGTTTCCAC CGATCGGCAC CACCCCCTAT CTGCTGACAC TGGCCGCTTA TGGTTTTTTC TGGTTCCGCC TGGAACCGGT GGAGGCGTTG CGCGATCAGA TGAAGGTACG GCCGACGCCT GAATTATTTA CCCTCGTCGC GACCGGGAAA CTGGAGACCA TTCTGGCCGG ACGTGAATTG GCGGCTTTCG AGCGCACTGT CGCACCGCGT TTTCTCGTCT CGCGGCCCTG GTTCGATAAT AGCGAGCGGA AGATCAGTTC CGTCAACGTG CGGGATTTCG CGATTCTGCG CAATGTTCAC CAGGGCCGTT TCATTCTGCC GCTCCTCGAT GTCGATTTCG ATAATGGCTC CGCGCAAGCC TATTTCACGC CCTTTGCCGC CGAAGCTGGC ACGGAGGACG AAAACGCGCT GACCCATGGT GTCGCCGTGC TGCGTCGGGC GGCCGAGACT GGTCTGCTCT ATGACGCCGA TGTCAATCCC GCTTTTGCGA TTGCGATGAT CGATGCCTTG CGGAGCGAGG CTGTCATGAC AACACCAAAG AGCAATCGTT TCGTCTTCCG GCCGACCAAA CTCCTCGCCG ACCGCCTCGA CGCGGAAGCC GATCTTACGG CGCTCTCCGT ACATCGGCTA GAGACTGAAG ACGACAAGAT TGCGCTGGCC CTCTCCAATC GGCTGATCCT CAAGATCAAT CACCGTCTTC ACGAGGGAGT AGAACCGGAA ATCGAGACCA GTCTGTTTTT GTCCAGCACG GCGCTTTTCA CCAATATGCC CGCCTTGCTC GGCACGATCG AATATGTCGA CAAGGAAGGA AATCGGACCG CCCTAGCAAT TCTGCAGAGC TTCATTCGCA GTCAGGGGGA CGCCTGGCGG TGGACACTGC ATGCCTTGAA GCGTGTGCTT GAAACACAGG CACTGGCGCC GACCTCGACA CAATCGGAAA CCGCACCACC TGATAGTTTT GCGACCTATG TTCCGCATAT GCGCCGGCTT GGGCAACGCA CCGCCGAATT ACACAAGGCC CTGGCAGTGG AGACAGACGA TCAGGCTTTC GCGGCCGAAC CCTTGACTTT CAAGGATGTC GAGGCAGCGG CCGCGCGTGC ACGCTCTCTC GCCGAGCGCG CTTTCACCCA TCTCGAACGT CTCAAGCGGC AAGCAAGTGT CACAGAAGAA ACCAGCAACG CTTGCATGGC TCTCCTGCAT CGCCAACAGG ACTGTTTTGC GCTGATCGAA CGCCTGACGC AGCCTCCCGT GGGGGCGATT AAGATCCGCA TTCACGGCGA TTATCATCTC GGTCAATTAC TGGTCGTGAA GGACGATGTC GTCATCCTCA ATTTTGAGGC CAATTCGGCC CGGACTATCG CAGAGCGACG CACCAAAGCC TCGCCCTTGC TCGATGTCGC CGATATGGTA CGTTCCTTCG CTTATGCGGT GGAAACCGCG CGGCGTGATC TGGCAAGACA ACTTCCCGGC ACCACAGTCG CAAGCGAACT TGCGAAGGAA CGCCTCCGTT TCTCCCGGGT CTTCATCGAT GCCTATATGG AAGCGGCCAC CGATAGCGCG ATCTGGATCA AGGACCAACC GACCCGCATA CGCCTGTTAC GTCTGTTTTT CCTGTCGAAG GCTCTCTCTG CGCTCGATCA CGAAGCCCTC AACCGACCCG ACTGGATCGC TCTTCCGATC GAAGGCGTCC TGCTCCTGCT CGACGAGACC AGTGAGCTCG CGTGA
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Protein sequence | MIDRNDVSWY RDAIIYQLHV KSFYDHDNDG MGDFKGLTAK LDYIKDLGAT AIWLMPFYPS PLRDDGYDIS DYRTINPAYG GLRDFRRFVR EAHERDLRVI TELVINHTSD QHPWFQRARA AKPGSAARNF YVFAENDHRY KDAGIVFLDT EKSNWTWDDE AKAFYWHRFY AHQPDLNFDN PRVIEAVLDI MVFWLDMGVD GLRLDAIPYL IEREGTNCEN LPETHAIIKK IRAALDARYS DRMLLAEANL WPEETAQYFG DGDECHMAFH FPLMPRIYMA LAQEDRHPIT DIMRQTPDIP ESAQWAIFLR NHDEMTLAMV TDKERDYLWS FYAADQRARI NLGIRRRLAP LLGNDRRKIE LLNSLLHSMP GTPVLYYGDE IGMGDNIYLG DRDGVRTPMQ WSVDRNGGFS RVDPAKLFLP AIQDPIYGYS AINVEAQLAS TTSLLNWTRR LIAVRRSHAA FGRGSLRFLY PSNRRVLAYL RLHEGETLLC VVNVSGSAQA VELDLAEFKN AVPVELMGGV LFPPIGTTPY LLTLAAYGFF WFRLEPVEAL RDQMKVRPTP ELFTLVATGK LETILAGREL AAFERTVAPR FLVSRPWFDN SERKISSVNV RDFAILRNVH QGRFILPLLD VDFDNGSAQA YFTPFAAEAG TEDENALTHG VAVLRRAAET GLLYDADVNP AFAIAMIDAL RSEAVMTTPK SNRFVFRPTK LLADRLDAEA DLTALSVHRL ETEDDKIALA LSNRLILKIN HRLHEGVEPE IETSLFLSST ALFTNMPALL GTIEYVDKEG NRTALAILQS FIRSQGDAWR WTLHALKRVL ETQALAPTST QSETAPPDSF ATYVPHMRRL GQRTAELHKA LAVETDDQAF AAEPLTFKDV EAAAARARSL AERAFTHLER LKRQASVTEE TSNACMALLH RQQDCFALIE RLTQPPVGAI KIRIHGDYHL GQLLVVKDDV VILNFEANSA RTIAERRTKA SPLLDVADMV RSFAYAVETA RRDLARQLPG TTVASELAKE RLRFSRVFID AYMEAATDSA IWIKDQPTRI RLLRLFFLSK ALSALDHEAL NRPDWIALPI EGVLLLLDET SELA
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