| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3013 |
|---|
| Symbol | |
|---|
| ID | 6198246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 3428789 |
|---|
| End bp | 3430318 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641706961 |
|---|
| Product | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
|---|
| Protein accession | YP_001834064 |
|---|
| Protein GI | 182679918 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0380] Trehalose-6-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.209405 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCCC TGGAACTCCT GCGTGAACAG ACCGCGCTGT CCAAGATAAA ACCCGCCGCT
CGCCTGGTCG TGGTTTCGAA CCGCGTTCCC ACAACGGGAT CCCCGAACGC CGGCGGCCTC
GCGGTCGCCC TCGAGGAAGC CTTGCAAACA CGCGGGGGCC TATGGTTCGG GTGGTCCGGC
AAGATCAGCC AGGACATTGA GGCGCCTCCC CACCCGCGCG TGAGCGGTTC CATCACCTAT
GCCGTCTGTG ACTTGTCGCG GCGCGACATG GAGGAATATT ACCACGGCTT CGCCAATCGC
GTGCTCTGGC CAATCTGCCA TTACCGGACC GATCTCGCCG AAATTTCCAC CCGCGACGCG
ACGGGCTATT TCCGCGTCAA TGAATATTTC GCCCGCGGCC TCGTCGATCT TTTGCAACCC
AACGATATCG TCTGGGTCCA TGATTACCAT TTTTTACCGC TGGCTTCATT CCTGCGGCAG
TTGGGCGCCG GCAATCGAAT CGGGTTCTTC CACCATATTC CCTGGCCCGC TATCGACATC
GCCATGACGA TGCCTTCCTA CGAGCGCCTT TTGCGGGCCA TGACCGCCTA TGATCTTCTC
GGTTTTCAGA CGCCCTATGA CGCCGCCAAT TTCCGGCATG GCCTTGATCA GACCGGAATC
GGCCAAATCC TCGACAAACA CAGATGCAAG GCCAATGGCC GGATCTTCAA GATCGGCGCC
TTCCCGATCA GCATCGATAC GCAAGCTTTC GCGGAAGAAG CCCGCAACGC CGAGAAAAAT
CCCGTCGTCC GCCGGGCCAG GGCGGCCTAT GATGGGCGCC CGCTCGCGAT CGGCGTCGAC
CGGCTCGATT ATACGAAGGG ATTGCCGCAA CGCATCGAGG CTTTCGGGAC CTTTCTCGAA
CGTTCGCCGC AAGCGGCCAA GGCCCGCACC ACGCTTTTGC AGGTTACCCC GAAATCCCGT
TCCGAAGTCC CCGAATATGC CCAATTGCAA TGCGCCGTGG CCGAACAGGT CGGCCGCGTC
AACGGCAAGC TCGGCGAGGT CGACTGGTCG CCCGTGGCCT ATCTCAATAA GACAATGAGC
CGCCCTGTCC TTGCCGGTCT TTACCGCATG GCGCGCGTCG GCCTCGTCAC GCCTTTGCGC
GATGGCATGA ATCTCGTCGC CAAGGAATAT GTCGCGGCGC AATCGCCCGA CGACCCCGGC
GTTCTGGTGC TCTCGCAATT CGCCGGTGCC GCCGTCGAAA TGGATGGAGC CTTGCTCGTC
AATCCCCATG ACACGGACGG CATGGCCGCC ACCATCGCGC GAGCGTTCAG CATGCCGATC
GCGGAACGCA AATATCGTTA CGCCGCGATG ATGGAACGGC TCGATGCCCA TGATGTCGCG
AATTGGTCCG ATCATTTCCT CGCCACCCTG GGAGAGCCGG ACGACATGGA CGCCCTTGGC
GGCGAGATTT TGCAGGAAAC GGCCTTGCCG CCGCCTCTTG ACGATCCGCT CCCGACCTGG
CCCGGCCGCT GGCCGAGCCT CGGCCATTAA
|
|---|
| Protein sequence | MVALELLREQ TALSKIKPAA RLVVVSNRVP TTGSPNAGGL AVALEEALQT RGGLWFGWSG
KISQDIEAPP HPRVSGSITY AVCDLSRRDM EEYYHGFANR VLWPICHYRT DLAEISTRDA
TGYFRVNEYF ARGLVDLLQP NDIVWVHDYH FLPLASFLRQ LGAGNRIGFF HHIPWPAIDI
AMTMPSYERL LRAMTAYDLL GFQTPYDAAN FRHGLDQTGI GQILDKHRCK ANGRIFKIGA
FPISIDTQAF AEEARNAEKN PVVRRARAAY DGRPLAIGVD RLDYTKGLPQ RIEAFGTFLE
RSPQAAKART TLLQVTPKSR SEVPEYAQLQ CAVAEQVGRV NGKLGEVDWS PVAYLNKTMS
RPVLAGLYRM ARVGLVTPLR DGMNLVAKEY VAAQSPDDPG VLVLSQFAGA AVEMDGALLV
NPHDTDGMAA TIARAFSMPI AERKYRYAAM MERLDAHDVA NWSDHFLATL GEPDDMDALG
GEILQETALP PPLDDPLPTW PGRWPSLGH
|
|---|
| |