Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2956 |
Symbol | |
ID | 6198382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 3365845 |
End bp | 3366603 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641706903 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001834012 |
Protein GI | 182679866 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3967] Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.717982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGATGA CAGGCAACAC GATCTTCATT ACCGGGGGAG CCTCCGGCAT TGGCCGCGGG CTCGCGGAAG CTTTTCACAA AATCGGCAAC AAGGTCATTG TCGCTGGCCG GCGCAAATCG CTGATCGATG AGGTTACAGC CGCCAATCCC GGCATCGAGG GTATCGAACT GGACGTCGCC GACCCCGCAA GCCTCGCTCA GGTGGCCGCA GCCCTCGTGC GTGACTATCC GGCGCTGAAC GTGCTCATCA ACAATGCCGG CGTCATGCCC TTCGACGATG CAGGCGGCGC AATCGACGAT GCCGCAATAC GCCGGGTCAT CGACACCAAC CTGCTGGGTC CGATCCGCCT GACTTCCGCT TTGATCGACC ATCTGAAACG GCAACAGCAA GCCGTTGTCA TCTACAACAC CTCGATTCTT GCCTATGTGC CGCTGGCGAC GGCGGCGGTC TATTCGGCGA GCAAGGCGGC GCTGCACTCC TATGCGCTGT CGCAGCGTTT CATGCTGCGC GATACCAATG TGCGCGTGCA GGAGATCGCG CCCCCCTGGG TCGATACCGA CCTCGTCAAG AAAAGCGGCG ACCCGCGCGC CATGCCGCTC GACCCTTTCA TCGCGGAGAC CATGAAGGGC CTTGCGACCG AAGCGGAAGA AGTGATCGTC GAGGCGATCC GGCCCCTGCG CGACAATCCC GGCAGTGGCG AACACAAATT CGTCAATGGC TTCAACGCCA GCCTCATCGC CAATCCGATT CCCGCCTGA
|
Protein sequence | MQMTGNTIFI TGGASGIGRG LAEAFHKIGN KVIVAGRRKS LIDEVTAANP GIEGIELDVA DPASLAQVAA ALVRDYPALN VLINNAGVMP FDDAGGAIDD AAIRRVIDTN LLGPIRLTSA LIDHLKRQQQ AVVIYNTSIL AYVPLATAAV YSASKAALHS YALSQRFMLR DTNVRVQEIA PPWVDTDLVK KSGDPRAMPL DPFIAETMKG LATEAEEVIV EAIRPLRDNP GSGEHKFVNG FNASLIANPI PA
|
| |