| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2936 |
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| Symbol | rpsA |
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| ID | 6201768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | - |
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| Start bp | 3347710 |
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| End bp | 3349443 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641706883 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001833993 |
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| Protein GI | 182679847 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCAA CTTCCACCTA CGCGCCCTCG CGCGAGGATT TCGCGGCGCT TCTTGACGAG
AGCTATGGCC AAAATGAAGC TCTTGAAGGT TCGGTCATTA AGGGCCGGGT CGTCGCCATC
GAGAAAGACG TCGCCGTTAT CGATATCGGT TTGAAGACCG AGGGGCGCGT CGCGCTCAAG
GAATTTCAGG GCCCCGGCCG GGAAGGTTCG CTGCAGGTCG GCGACGAGGT CGAAGTCTAT
CTCGAACGGA TCGAGAATGC GCTCGGCGAG GCGGTGATCT CGCGCGACAA GGCTCGGCGC
GAAGAGAGCT GGGTCAAGCT CGAAAAGGCT TTCGAGAACC AGGAAAAGGT TGAAGGCATC
ATCTTCAATC AAGTTAAGGG TGGCTTTACC GTTGATCTCG ACGGCGCCGT GGCCTTCCTG
CCGCGCAGCC AGGTCGATAT TCGGCCCATC CGCGATGTCG CGCCCTTGAT GCAGGTGCCG
CAGCCCTTCC AGATCCTGAA AATGGATCGT CGCCGTGGCA ATATTGTCGT TTCGCGCCGT
ACGGTTCTTG AGGAATCCCG CGCCGAGCAG CGCCATGAGA TCGTCGCCAA CCTCGAGGAA
GGTCAGGTGA TCGAAGGTAT GGTGAAGAAC ATCACCGATT ACGGTGCCTT CGTCGATCTC
GGCGGCATCG ACGGTTTGTT GCATGTCACC GATATTGCCT GGCGCCGCGT CAATCATCCG
ACCGAGGTTC TGACCATCGG CCAGACGGTT CGTGTCAAGA TCATCAAGAT CAACCACGAG
ACGCACCGCA TCTCGCTCGG TATGAAGCAA TTGCTGGATG ATCCCTGGCA GGGGATCGAG
GCCAAATATC CGATCAATGC GCGCTTCCAT GGCCGCGTGA CGAATATCAC CGATTACGGC
GCGTTCGTCG AGCTGGAGCC CGGCATCGAG GGCTTGATCC ACGTTTCCGA AATGTCCTGG
ACAAAGAAGA ACGTGCATCC CGGCAAGATC GTCGCGACGA GCCAGGAAGT CGATGTCCAG
GTGCTGGAAG TCGATCCCGT CAAGCGCCGC ATTTCGCTCG GCCTCAAACA GACGCTCGCC
AATCCGTGGG AGACCTTCGC CGAGAAATAT CCGGTTGGTT CCGAAGTCGA GGGCGAGGTC
AAGAACAAGA CCGAGTTCGG CCTGTTCATC GGTCTCGATG GCGATGTCGA TGGCATGGTG
CATCTCTCCG ATCTCGACTG GAACAAGCCA GGCGAGCAAG CGATCGAGGA TTACAAGAAG
GGCGATATCG TTCGCGCCAA GGTCCTCGAC GTCGATATGG AGAAGGAGCG GATTTCGCTC
GGCATCAAGC AGCTTGCCAG CGATCCCTTC GCCGTGAAGG CGCCGGAAGT CGCTGGTGAG
GAATCCGGCG ATCTCAAGAA GGGCGCTGTC GTCACGTGCG AAGTGCTCGA AGTGAAGGAA
GGCGGGCTCG AAGTCCAGAT CGCTGGCACC GATCTCACCG CTTTCATCAA GCGGGCCGAA
CTTGCACGCG ATCGTGCCGA TCAGCGGCCG GAGCGTTTTG CTGTTGGCGA GAAGGTCGAT
GTGCGCATCA CCCAGTTCGA TCGCCGCGCG CGCAAGATCG CGGTTTCGAT CAAGGCGCTC
GAAGTGGCCG AGGAGAAGGA AGCGATCGCC CAATATGGTT CGGCCGATTC CGGTGCCTCG
CTGGGCGATA TTCTCGGCGC GGCCTTGAAG GCTCGCGACG GCAAGAAAGA ATAA
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| Protein sequence | MASTSTYAPS REDFAALLDE SYGQNEALEG SVIKGRVVAI EKDVAVIDIG LKTEGRVALK
EFQGPGREGS LQVGDEVEVY LERIENALGE AVISRDKARR EESWVKLEKA FENQEKVEGI
IFNQVKGGFT VDLDGAVAFL PRSQVDIRPI RDVAPLMQVP QPFQILKMDR RRGNIVVSRR
TVLEESRAEQ RHEIVANLEE GQVIEGMVKN ITDYGAFVDL GGIDGLLHVT DIAWRRVNHP
TEVLTIGQTV RVKIIKINHE THRISLGMKQ LLDDPWQGIE AKYPINARFH GRVTNITDYG
AFVELEPGIE GLIHVSEMSW TKKNVHPGKI VATSQEVDVQ VLEVDPVKRR ISLGLKQTLA
NPWETFAEKY PVGSEVEGEV KNKTEFGLFI GLDGDVDGMV HLSDLDWNKP GEQAIEDYKK
GDIVRAKVLD VDMEKERISL GIKQLASDPF AVKAPEVAGE ESGDLKKGAV VTCEVLEVKE
GGLEVQIAGT DLTAFIKRAE LARDRADQRP ERFAVGEKVD VRITQFDRRA RKIAVSIKAL
EVAEEKEAIA QYGSADSGAS LGDILGAALK ARDGKKE
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